BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028524
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   153   2e-35
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   151   6e-35
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   149   3e-34
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   147   9e-34
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   146   2e-33

>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/105 (70%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   VVPGDVVLDLSTMSDHIIKLGSGLRQDGDSVSVIKAGVLRFTKPNKYWVESSHKRYVPCA 182
           VVPGDVV+DLS+M++  IKLGSGLRQD D++SV+KAG LRF+KPNKYWVE+S KRYVPCA
Sbjct: 17  VVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYWVETSQKRYVPCA 76

Query: 183 GDSILGIVVDSKADNFLVDIKXXXXXXXXXXXXEGGTRRNIPRFE 317
            DS+LGIVVDSK+DNFL+DIK            EGGTRRNIP+FE
Sbjct: 77  EDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFE 121


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/106 (70%), Positives = 85/106 (80%)
 Frame = +3

Query: 3   VVPGDVVLDLSTMSDHIIKLGSGLRQDGDSVSVIKAGVLRFTKPNKYWVESSHKRYVPCA 182
           V PGDVVLDLSTM++  IKLG GLRQDGD +SV+KAG LRF+KPNKYWVESS KRYVP A
Sbjct: 17  VYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKPNKYWVESSQKRYVPHA 76

Query: 183 GDSILGIVVDSKADNFLVDIKXXXXXXXXXXXXEGGTRRNIPRFEV 320
            DS+LGI+VDS++DNFLVDIK            EGGTRRNIP+FEV
Sbjct: 77  EDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEV 122


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/106 (68%), Positives = 83/106 (78%)
 Frame = +3

Query: 3   VVPGDVVLDLSTMSDHIIKLGSGLRQDGDSVSVIKAGVLRFTKPNKYWVESSHKRYVPCA 182
           VVPGDVVLDLS M++  IKLG GLRQD D++SV K G LRF+KPNKYWVESS KRYVPCA
Sbjct: 17  VVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPNKYWVESSQKRYVPCA 76

Query: 183 GDSILGIVVDSKADNFLVDIKXXXXXXXXXXXXEGGTRRNIPRFEV 320
            D +LGIV+DS+ADNFLVDIK            EGGTRRNIP+FE+
Sbjct: 77  EDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEM 122


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/105 (69%), Positives = 81/105 (77%)
 Frame = +3

Query: 3   VVPGDVVLDLSTMSDHIIKLGSGLRQDGDSVSVIKAGVLRFTKPNKYWVESSHKRYVPCA 182
           VVPGDVVLDLS M +  IKLG GL QD D+++V KAG LRF+KPNKYWVESS KRYVPC 
Sbjct: 14  VVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVESSQKRYVPCV 73

Query: 183 GDSILGIVVDSKADNFLVDIKXXXXXXXXXXXXEGGTRRNIPRFE 317
            D++LGIVVDSKADNFLVDIK            EGGTRRNIP+FE
Sbjct: 74  EDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 118


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/106 (67%), Positives = 84/106 (79%)
 Frame = +3

Query: 3   VVPGDVVLDLSTMSDHIIKLGSGLRQDGDSVSVIKAGVLRFTKPNKYWVESSHKRYVPCA 182
           V PGDV+LDLS M++  IKLG GLRQD D++SV+KAG LRF+KPNKYWVE+S KRYVP A
Sbjct: 17  VCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKYWVENSQKRYVPHA 76

Query: 183 GDSILGIVVDSKADNFLVDIKXXXXXXXXXXXXEGGTRRNIPRFEV 320
            DS+LGIVVDS++DNFLVDIK            EGGTRRNIPRFE+
Sbjct: 77  EDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRFEI 122