BLASTX nr result

ID: Cephaelis21_contig00028509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028509
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   149   2e-34
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   149   2e-34
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...   144   6e-33
ref|XP_002881100.1| tRNA pseudouridine synthase family protein [...   144   6e-33

>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  149 bits (375), Expect(2) = 2e-34
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = -1

Query: 261 IEGELEKAIYKAGGIRDSNYGDLQKIGWARSSRTDKGVHSLATMISLKMEIPENAWKDDL 82
           IEGELE A++KAGGIRDSNYG+L KIGW RSSRTDKGVHSLATMISLKMEIP NAWK+D 
Sbjct: 91  IEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDP 150

Query: 81  NGTALANYVNSFLPENVQVFSILPSQR 1
           NG ALANYVN  LP N++VFSILPSQR
Sbjct: 151 NGIALANYVNFHLPNNIKVFSILPSQR 177



 Score = 21.9 bits (45), Expect(2) = 2e-34
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3

Query: 313 GLQMQRDEHAL 281
           GLQMQRDE +L
Sbjct: 78  GLQMQRDESSL 88


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  149 bits (375), Expect(2) = 2e-34
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = -1

Query: 261 IEGELEKAIYKAGGIRDSNYGDLQKIGWARSSRTDKGVHSLATMISLKMEIPENAWKDDL 82
           IEGELE A++KAGGIRDSNYG+L KIGW RSSRTDKGVHSLATMISLKMEIP NAWK+D 
Sbjct: 91  IEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDP 150

Query: 81  NGTALANYVNSFLPENVQVFSILPSQR 1
           NG ALANYVN  LP N++VFSILPSQR
Sbjct: 151 NGIALANYVNFHLPNNIKVFSILPSQR 177



 Score = 21.9 bits (45), Expect(2) = 2e-34
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3

Query: 313 GLQMQRDEHAL 281
           GLQMQRDE +L
Sbjct: 78  GLQMQRDESSL 88


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  149 bits (375), Expect(2) = 2e-34
 Identities = 72/87 (82%), Positives = 78/87 (89%)
 Frame = -1

Query: 261 IEGELEKAIYKAGGIRDSNYGDLQKIGWARSSRTDKGVHSLATMISLKMEIPENAWKDDL 82
           IEGELE A++KAGGIRDSNYG+L KIGW RSSRTDKGVHSLATMISLKMEIP NAWK+D 
Sbjct: 91  IEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDP 150

Query: 81  NGTALANYVNSFLPENVQVFSILPSQR 1
           NG ALANYVN  LP N++VFSILPSQR
Sbjct: 151 NGIALANYVNFHLPNNIKVFSILPSQR 177



 Score = 21.9 bits (45), Expect(2) = 2e-34
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3

Query: 313 GLQMQRDEHAL 281
           GLQMQRDE +L
Sbjct: 78  GLQMQRDESSL 88


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/87 (80%), Positives = 75/87 (86%)
 Frame = -1

Query: 261 IEGELEKAIYKAGGIRDSNYGDLQKIGWARSSRTDKGVHSLATMISLKMEIPENAWKDDL 82
           IEGELE AIYKAGGIRDSNYGDL KIGWARSSRTDKGVHSLAT ISLKMEIPE AWKDD 
Sbjct: 91  IEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDP 150

Query: 81  NGTALANYVNSFLPENVQVFSILPSQR 1
            GT LA  ++  LPEN++VFS+LPS R
Sbjct: 151 QGTVLAKCISKHLPENIRVFSVLPSNR 177


>ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326939|gb|EFH57359.1| tRNA
           pseudouridine synthase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/87 (80%), Positives = 75/87 (86%)
 Frame = -1

Query: 261 IEGELEKAIYKAGGIRDSNYGDLQKIGWARSSRTDKGVHSLATMISLKMEIPENAWKDDL 82
           IEGELE AIYKAGGIRDSNYGDL KIGWARSSRTDKGVHSLAT ISLKMEIPE AWKDD 
Sbjct: 91  IEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDP 150

Query: 81  NGTALANYVNSFLPENVQVFSILPSQR 1
            GT LA  ++  LPEN++VFS+LPS R
Sbjct: 151 QGTVLAKCISKHLPENIRVFSVLPSNR 177


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