BLASTX nr result

ID: Cephaelis21_contig00028504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028504
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40923.3| unnamed protein product [Vitis vinifera]              206   3e-51
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   191   1e-46
ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...   174   8e-42
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   173   2e-41

>emb|CBI40923.3| unnamed protein product [Vitis vinifera]
          Length = 6988

 Score =  206 bits (523), Expect = 3e-51
 Identities = 97/155 (62%), Positives = 115/155 (74%)
 Frame = +2

Query: 2   KRERWANEEADSLGVGKLYNFAEDGFNSWHRWETFVFLYEMLEEYGTHLVEAAWNHQMNL 181
           KR RWA++EA SLGVGK+    +    S  RW  F+ LYEMLEEYGTHLVEAAWNHQ+ L
Sbjct: 402 KRGRWADKEAKSLGVGKICQSVDLFLTSQQRWLAFILLYEMLEEYGTHLVEAAWNHQITL 461

Query: 182 LLHSSFALENSVNSVFGKQRGNSMQTLEEIYEWLIVLWERGFCHDNPQVRCLIMQSFLGI 361
           LLH SF   NS+NS+ G+   N M +LEEI+ WL +LWERG CHDNPQVRCLIMQSFLGI
Sbjct: 462 LLHFSFP-NNSINSLNGEIFQNQMSSLEEIFNWLSILWERGLCHDNPQVRCLIMQSFLGI 520

Query: 362 AWKDCGSHARMLPQEFILGPLVEALNDPVHHKDFG 466
            WK     A+ +P+ F+ G  ++ALNDPVHHKDFG
Sbjct: 521 EWKKHRDFAKSVPESFVFGSFMQALNDPVHHKDFG 555


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score =  191 bits (484), Expect = 1e-46
 Identities = 91/155 (58%), Positives = 109/155 (70%)
 Frame = +2

Query: 2   KRERWANEEADSLGVGKLYNFAEDGFNSWHRWETFVFLYEMLEEYGTHLVEAAWNHQMNL 181
           KR  WA++EA SLGVGKL N  +   +   +WE F+ LYEMLEEYGTHLVEAAW HQ+ L
Sbjct: 304 KRAIWADKEAKSLGVGKLCNSMDSPLDGRQQWEAFILLYEMLEEYGTHLVEAAWEHQVTL 363

Query: 182 LLHSSFALENSVNSVFGKQRGNSMQTLEEIYEWLIVLWERGFCHDNPQVRCLIMQSFLGI 361
           LL  S + +N  NS+ G Q+ N    L E++ WL +LW+ GF HDNPQVRCLIMQSFLGI
Sbjct: 364 LLQFSVSYDNFANSICGIQQ-NQTAVLGEVFSWLTILWQLGFRHDNPQVRCLIMQSFLGI 422

Query: 362 AWKDCGSHARMLPQEFILGPLVEALNDPVHHKDFG 466
            W      A+ +P+ FILG  VE LNDPVHHKDFG
Sbjct: 423 EWMKYHDAAKSVPESFILGSFVEGLNDPVHHKDFG 457


>ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|222833999|gb|EEE72476.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  184 bits (467), Expect = 1e-44
 Identities = 84/154 (54%), Positives = 107/154 (69%)
 Frame = +2

Query: 2   KRERWANEEADSLGVGKLYNFAEDGFNSWHRWETFVFLYEMLEEYGTHLVEAAWNHQMNL 181
           KRE WA++EA SLGV +  N A+   NS  +WE F+ LYEML+EYGTHLVEAAW+HQ+NL
Sbjct: 304 KREMWADKEAKSLGVWEPCNSADSPLNSQQQWEAFILLYEMLQEYGTHLVEAAWHHQLNL 363

Query: 182 LLHSSFALENSVNSVFGKQRGNSMQTLEEIYEWLIVLWERGFCHDNPQVRCLIMQSFLGI 361
           LL  S +  N  + +F          L E + W+ +LW+ GF HDNPQVRCLIM+SFLGI
Sbjct: 364 LLQFSVSNNNFTSYIFRGFHQKQTDILREAFSWVTILWQLGFQHDNPQVRCLIMESFLGI 423

Query: 362 AWKDCGSHARMLPQEFILGPLVEALNDPVHHKDF 463
            W   G+ A+ + + F+LGP +E LNDPVHHKDF
Sbjct: 424 EWMKYGNTAKSVSESFVLGPFIEGLNDPVHHKDF 457


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
           methyltransferase (SpoU) family protein [Arabidopsis
           thaliana]
          Length = 1850

 Score =  174 bits (442), Expect = 8e-42
 Identities = 80/158 (50%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
 Frame = +2

Query: 2   KRERWANEEADSLGVGKLYNFAEDGFNSWHRWETFVFLYEMLEEYGTHLVEAAWNHQMNL 181
           ++E WA +EA SLGVG+LY   + G  S   W+ F+ LYEMLEEYGTHLVEAAW++Q++L
Sbjct: 392 RKETWAEKEAKSLGVGELYGSVDSGLTSQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDL 451

Query: 182 LLHSSFALENSVNSVFGKQRGNSMQTLEE---IYEWLIVLWERGFCHDNPQVRCLIMQSF 352
           L+ SS   + ++ S         M+T +E   I+ WL VLW RGF HDNP VRC +M+SF
Sbjct: 452 LIKSSLRYDGTLKSDCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESF 511

Query: 353 LGIAWKDCGSHARMLPQEFILGPLVEALNDPVHHKDFG 466
            GI W+   +  + + Q F+LGP +E LNDP HHKDFG
Sbjct: 512 FGIEWRRYKTCTQSMSQTFVLGPFIEGLNDPTHHKDFG 549


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/156 (55%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   KRERWANEEADSLGVGKLYNFAEDGFNS-WHRWETFVFLYEMLEEYGTHLVEAAWNHQMN 178
           KRERWAN+EA SLGVG++ +  +   NS   +WE F+ LYEMLEEYG+HLVEAAW+HQ++
Sbjct: 404 KRERWANKEAKSLGVGQICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQIS 463

Query: 179 LLLHSSFALENSVNSVFGKQRGNSMQTLEEIYEWLIVLWERGFCHDNPQVRCLIMQSFLG 358
           LLL    + E   +S       N ++   EIY WL +LW RGF HDNP VRCLIMQ FL 
Sbjct: 464 LLLQHPTSTE--FDSFSSGVHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLT 521

Query: 359 IAWKDCGSHARMLPQEFILGPLVEALNDPVHHKDFG 466
           I W+D     + LP+ FI+GP +EALNDPV HKDFG
Sbjct: 522 IEWRDKVPCLKSLPETFIIGPFIEALNDPVQHKDFG 557


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