BLASTX nr result

ID: Cephaelis21_contig00028503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028503
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   111   5e-23
ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...   102   2e-20
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   100   2e-19
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...    77   1e-12
ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [...    77   1e-12

>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/123 (53%), Positives = 78/123 (63%), Gaps = 8/123 (6%)
 Frame = -1

Query: 346 LKQVYSSCTIDAAASFLFQYCSYLDERKLIKFLSGLASVAKKHPFGRPGLMCLAECVASA 167
           +K VY+S TI+AAA FL QY  YL+ RK I FL  LASVAK   FGR GLM LAEC+ASA
Sbjct: 458 VKGVYTSRTIEAAARFLCQYTRYLNARKEIVFLHSLASVAKHQSFGRAGLMGLAECIASA 517

Query: 166 AHGIKQHKNPEIACYIDASTEEMVQWKN--------EKADLLDFLRFIIESSKQHFNPNY 11
           A G+      E     DA  +E+  W +         K DLLD LR++IESSKQHFNP Y
Sbjct: 518 ACGVGLRDGNEAEWTKDALCDEV--WLDSSSKKVHINKTDLLDVLRYVIESSKQHFNPKY 575

Query: 10  RFQ 2
           RF+
Sbjct: 576 RFR 578


>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
 Frame = -1

Query: 346 LKQVYSSCTIDAAASFLFQYCSYLDERKLIKFLSGLASVAKKHPFGRPGLMCLAECVASA 167
           LK +YSS T++ AA F+ QY + LD R  + FL  L S+A+K  FGR GL+ L+EC+ASA
Sbjct: 558 LKGIYSSKTVEGAARFVCQYTNILDARTRVVFLHQLTSLARKKSFGRVGLISLSECIASA 617

Query: 166 AHGIKQHKNPEIACYID---ASTEEMVQWKNE-KADLLDFLRFIIESSKQHFNPNYRFQ 2
           A  +    N E  C+     +S E+++ +  E K +LLD LRF++ESSKQHFNP+YR Q
Sbjct: 618 ASIVGFDYNIEGECFNGSSLSSQEDLIPYSLECKLELLDDLRFVVESSKQHFNPSYRLQ 676


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
 Frame = -1

Query: 346 LKQVYSSCTIDAAASFLFQYCSYLDERKLIKFLSGLASVAKKHPFGRPGLMCLAECVASA 167
           LK +YSS T++ AA F+ QY + LD R  + FL  L S+A+K  FGR GL+ L+EC+ASA
Sbjct: 558 LKGIYSSKTVEGAARFVCQYTNILDARTRVVFLHQLTSLARKKSFGRVGLISLSECIASA 617

Query: 166 AHGIKQHKNPEIACYID---ASTEEMVQWKNE-KADLLDFLRFIIESSKQHFNPNYRFQ 2
           A  +    N E  C+     +S E+++ +  E K +LLD LRF++ESSKQHFNP+Y  Q
Sbjct: 618 ASIVGFDYNIEGECFNGSSLSSQEDLIPYSLECKLELLDDLRFVVESSKQHFNPSYLLQ 676


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
           methyltransferase (SpoU) family protein [Arabidopsis
           thaliana]
          Length = 1850

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
 Frame = -1

Query: 346 LKQVYSSCTIDAAASFLFQYCSYLDERKLIKFLSGLASVAKKHPFGRPGLMCLAECVASA 167
           LK +Y+S TI+ AA ++  Y S L+ R  + FL  LAS+AKK  F R G M L +C+ S 
Sbjct: 550 LKGIYTSRTIEGAAQYVSAYTSCLNPRNRVGFLINLASLAKKQSFCRAGFMALVQCIVST 609

Query: 166 AHGIKQHKNPEIACYIDASTEEMVQ------WKNEKADLLDFLRFIIESSKQHFNPNYRF 5
           A+ +  + + E+    D  +    +       +++   +LD L+F+ ESS+QHFN  YR 
Sbjct: 610 AYVVGGYGDKEMGHLEDKFSGTAQESSCGHLSQDDMTHILDVLKFVAESSRQHFNHKYRI 669

Query: 4   Q 2
           +
Sbjct: 670 R 670


>ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA
           methyltransferase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1852

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
 Frame = -1

Query: 346 LKQVYSSCTIDAAASFLFQYCSYLDERKLIKFLSGLASVAKKHPFGRPGLMCLAECVASA 167
           LK +Y+S TI+ AA ++  Y S L+ R  + FL  LAS+AKK  F R G M L +C+ S 
Sbjct: 547 LKGIYTSRTIEGAAQYVCAYTSCLNPRNRVGFLINLASLAKKQSFCRAGFMALVQCIVST 606

Query: 166 AHGIKQHKNPEIACYID--------ASTEEMVQWKNEKADLLDFLRFIIESSKQHFNPNY 11
           A+ +  + + E+    D         S E + Q  ++   +LD L+F+ ESS+QHFN  Y
Sbjct: 607 AYVVGGYGDKEMGHLEDKFSGTAHEPSCEHLSQ--DDMTHILDVLKFVAESSRQHFNHKY 664

Query: 10  R 8
           +
Sbjct: 665 Q 665


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