BLASTX nr result

ID: Cephaelis21_contig00028424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028424
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37461.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat...    99   5e-19
ref|XP_002322117.1| predicted protein [Populus trichocarpa] gi|2...    70   6e-15

>emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 45/93 (48%), Positives = 65/93 (69%)
 Frame = +1

Query: 301 SAIKFFQWSENVVGLNHTLESHSMLCHLLLSKRVFDDARWVFVRMVEKFGDFDCLSVFDE 480
           SA++FF+W+EN +GL H ++S   + H+LL  R+FD A  VF RMV +FG+ + L  F  
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 481 GFGYYGSNKSTVFSFFVECYCRIGLINRSVELF 579
            F  YGSN STV+SF + CYCR G+++R+V+ F
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTF 163


>ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 45/93 (48%), Positives = 65/93 (69%)
 Frame = +1

Query: 301 SAIKFFQWSENVVGLNHTLESHSMLCHLLLSKRVFDDARWVFVRMVEKFGDFDCLSVFDE 480
           SA++FF+W+EN +GL H ++S   + H+LL  R+FD A  VF RMV +FG+ + L  F  
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 481 GFGYYGSNKSTVFSFFVECYCRIGLINRSVELF 579
            F  YGSN STV+SF + CYCR G+++R+V+ F
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTF 163


>ref|XP_002322117.1| predicted protein [Populus trichocarpa] gi|222869113|gb|EEF06244.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score = 69.7 bits (169), Expect(2) = 6e-15
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = +1

Query: 292 KTNSAIKFFQWSENVVGLNHTLESHSMLCHLLLSKRVFDDARWVFVRMVEKFG-DFDCLS 468
           K  SAI+FF+W+E+      +  S   L H+LL  ++F  A  VF + + +FG D+D L 
Sbjct: 93  KPFSAIRFFEWAESFFISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLD 152

Query: 469 VFDEGF-GYYGSNKSTVFSFFVECYCRIGLINRSVELFFQL 588
            F +GF     +N S V+ F +E YCR G+ ++SV++F  +
Sbjct: 153 AFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHV 193



 Score = 36.2 bits (82), Expect(2) = 6e-15
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +2

Query: 131 FILSHSFSGSPLPKSLESQITAAFY-QENLKLIDPKVVSKILPFHVGSILYSLRSKPIRQ 307
           +  S S S      SL  QI  AF+ Q+N K ++P ++SK+  +HV  ++ SL+ KP   
Sbjct: 38  YFFSSSSSSKNKNWSLIHQIVKAFHNQQNPKPLNPILLSKLQLYHVPDVIISLQPKPFSA 97

Query: 308 LSSF 319
           +  F
Sbjct: 98  IRFF 101


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