BLASTX nr result

ID: Cephaelis21_contig00028359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028359
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana]            59   5e-07
ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-07
dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop...    58   9e-07
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AAB61044.1| contains similarity to A. thaliana zinc finger pr...    57   2e-06

>dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana]
          Length = 224

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = +1

Query: 52  WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225
           WG+  LV GR   GN F F FP+   L  ++  GP+A    +L+L+RW    P N+  + 
Sbjct: 23  WGQSGLVHGRLISGNQFQFIFPSEESLDTVMRRGPWAFNDRMLILQRW---FPTNQPLIN 79

Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEVQEVKSG 336
            +  W++I GIP           +   +G + EV  G
Sbjct: 80  FIPFWIQIRGIPYHYLTREVIAHVGRALGNLMEVDFG 116


>ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332644154|gb|AEE77675.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 336

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
 Frame = +1

Query: 52  WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225
           WG+  LV GR  +G  F F F     L  +L  GP+A    +++L+RWEPQIPL      
Sbjct: 157 WGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRWEPQIPL----FP 212

Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEV 318
            +  WV+I GIP +         I   +G+V
Sbjct: 213 FIPFWVQIRGIPFQFLNRGVVEHIGRALGQV 243


>dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
          Length = 241

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
 Frame = +1

Query: 52  WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225
           WG+  LV GR  +G  F F F     L  +L  GP+A    +++L+RWEPQIPL      
Sbjct: 62  WGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRWEPQIPL----FP 117

Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEV 318
            +  WV+I GIP +         I   +G+V
Sbjct: 118 FIPFWVQIRGIPFQFLNRGVVEHIGRALGQV 148


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/73 (28%), Positives = 41/73 (56%)
 Frame = +1

Query: 97  VFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVTHVLLWVRISGIPIECFC 276
           VF+F T  ++H +L  GP+   G  ++L++W P    ++ K++ + +W+R+ G+P   + 
Sbjct: 439 VFRFKTEAEMHVVLEKGPWMFGGKAIILQQWHPHFVFDKNKISKLPVWIRLHGLPFPLWS 498

Query: 277 PSAARWIAEMVGE 315
            S     A M G+
Sbjct: 499 KSGLSLAASMAGK 511


>gb|AAB61044.1| contains similarity to A. thaliana zinc finger protein
           (PID:g976277) [Arabidopsis thaliana]
          Length = 287

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +1

Query: 52  WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQI---PLNRI 216
           WG+  LV GR   GN F F FP+   L  ++  GP A    +L+L+RW P     PLN I
Sbjct: 62  WGQSGLVHGRLIPGNQFQFIFPSEESLEMVVRRGPGAFNDRMLILQRWTPMANAPPLNTI 121

Query: 217 KVTHVLLWVRISGIPIECFCPSAARWIAEMVGEVQEV 327
                  W++I GIP +         I   +G+V +V
Sbjct: 122 P-----FWIQIRGIPYQFLSRDVIEAIGRAIGDVMDV 153


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