BLASTX nr result
ID: Cephaelis21_contig00028359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00028359 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana] 59 5e-07 ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ... 58 9e-07 dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop... 58 9e-07 ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 gb|AAB61044.1| contains similarity to A. thaliana zinc finger pr... 57 2e-06 >dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana] Length = 224 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%) Frame = +1 Query: 52 WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225 WG+ LV GR GN F F FP+ L ++ GP+A +L+L+RW P N+ + Sbjct: 23 WGQSGLVHGRLISGNQFQFIFPSEESLDTVMRRGPWAFNDRMLILQRW---FPTNQPLIN 79 Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEVQEVKSG 336 + W++I GIP + +G + EV G Sbjct: 80 FIPFWIQIRGIPYHYLTREVIAHVGRALGNLMEVDFG 116 >ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] gi|332644154|gb|AEE77675.1| uncharacterized protein [Arabidopsis thaliana] Length = 336 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +1 Query: 52 WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225 WG+ LV GR +G F F F L +L GP+A +++L+RWEPQIPL Sbjct: 157 WGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRWEPQIPL----FP 212 Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEV 318 + WV+I GIP + I +G+V Sbjct: 213 FIPFWVQIRGIPFQFLNRGVVEHIGRALGQV 243 >dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana] Length = 241 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +1 Query: 52 WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVT 225 WG+ LV GR +G F F F L +L GP+A +++L+RWEPQIPL Sbjct: 62 WGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRWEPQIPL----FP 117 Query: 226 HVLLWVRISGIPIECFCPSAARWIAEMVGEV 318 + WV+I GIP + I +G+V Sbjct: 118 FIPFWVQIRGIPFQFLNRGVVEHIGRALGQV 148 >ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1| predicted protein [Populus trichocarpa] Length = 949 Score = 56.6 bits (135), Expect = 2e-06 Identities = 21/73 (28%), Positives = 41/73 (56%) Frame = +1 Query: 97 VFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQIPLNRIKVTHVLLWVRISGIPIECFC 276 VF+F T ++H +L GP+ G ++L++W P ++ K++ + +W+R+ G+P + Sbjct: 439 VFRFKTEAEMHVVLEKGPWMFGGKAIILQQWHPHFVFDKNKISKLPVWIRLHGLPFPLWS 498 Query: 277 PSAARWIAEMVGE 315 S A M G+ Sbjct: 499 KSGLSLAASMAGK 511 >gb|AAB61044.1| contains similarity to A. thaliana zinc finger protein (PID:g976277) [Arabidopsis thaliana] Length = 287 Score = 56.6 bits (135), Expect = 2e-06 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 5/97 (5%) Frame = +1 Query: 52 WGECILVVGR--DGNIFVFQFPTVNQLHAILHNGPYAVAGSLLVLRRWEPQI---PLNRI 216 WG+ LV GR GN F F FP+ L ++ GP A +L+L+RW P PLN I Sbjct: 62 WGQSGLVHGRLIPGNQFQFIFPSEESLEMVVRRGPGAFNDRMLILQRWTPMANAPPLNTI 121 Query: 217 KVTHVLLWVRISGIPIECFCPSAARWIAEMVGEVQEV 327 W++I GIP + I +G+V +V Sbjct: 122 P-----FWIQIRGIPYQFLSRDVIEAIGRAIGDVMDV 153