BLASTX nr result

ID: Cephaelis21_contig00028278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028278
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...    80   4e-15
emb|CBI20795.3| unnamed protein product [Vitis vinifera]               80   4e-15
sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protei...    79   1e-14
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...    84   1e-14
sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related prote...    77   3e-14

>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score = 79.7 bits (195), Expect(2) = 4e-15
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -3

Query: 144 IQLSQHMREGVYCFF*KVLSQRTTLFFNRHIDQIILCCFYDVAKISQL 1
           +QLSQ MRE VYC F ++L++RT+LFFNRHIDQIILCCFY +AKISQ+
Sbjct: 750 LQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLAKISQM 797



 Score = 26.2 bits (56), Expect(2) = 4e-15
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -1

Query: 188 EIVKLAAVRIIGMVEYSCLS 129
           +I+KLAAVRI GMVE   LS
Sbjct: 734 KIIKLAAVRINGMVERLQLS 753


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score = 79.7 bits (195), Expect(2) = 4e-15
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -3

Query: 144 IQLSQHMREGVYCFF*KVLSQRTTLFFNRHIDQIILCCFYDVAKISQL 1
           +QLSQ MRE VYC F ++L++RT+LFFNRHIDQIILCCFY +AKISQ+
Sbjct: 749 LQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLAKISQM 796



 Score = 26.2 bits (56), Expect(2) = 4e-15
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -1

Query: 188 EIVKLAAVRIIGMVEYSCLS 129
           +I+KLAAVRI GMVE   LS
Sbjct: 733 KIIKLAAVRINGMVERLQLS 752


>sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protein 1; Short=PsRB1
           gi|6681366|dbj|BAA88690.1| retinoblastoma-related
           protein [Pisum sativum]
          Length = 1026

 Score = 79.0 bits (193), Expect(2) = 1e-14
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -3

Query: 144 IQLSQHMREGVYCFF*KVLSQRTTLFFNRHIDQIILCCFYDVAKISQL 1
           +QLSQ +RE VYC F ++L+Q T+LFFNRHIDQIILCCFY VAKISQL
Sbjct: 762 LQLSQQIRENVYCLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQL 809



 Score = 25.4 bits (54), Expect(2) = 1e-14
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -1

Query: 188 EIVKLAAVRIIGMVEYSCLS 129
           +IVKL AVRI GMVE   LS
Sbjct: 746 KIVKLGAVRISGMVERLQLS 765


>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
           gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
           baicalensis]
          Length = 1006

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -3

Query: 144 IQLSQHMREGVYCFF*KVLSQRTTLFFNRHIDQIILCCFYDVAKISQL 1
           +QLSQ +RE VYC F K+LSQRTTLFFNRHIDQI+LCCFY V+KISQL
Sbjct: 749 LQLSQQIRESVYCLFQKILSQRTTLFFNRHIDQILLCCFYGVSKISQL 796


>sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
           gi|62956049|gb|AAY23367.1| retinoblastoma-related
           protein [Medicago sativa]
          Length = 1025

 Score = 77.4 bits (189), Expect(2) = 3e-14
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -3

Query: 144 IQLSQHMREGVYCFF*KVLSQRTTLFFNRHIDQIILCCFYDVAKISQL 1
           +QLSQ  RE VY  F ++L+QRT+LFFNRHIDQIILCCFY VAKISQL
Sbjct: 761 LQLSQQTRENVYSLFQRILNQRTSLFFNRHIDQIILCCFYGVAKISQL 808



 Score = 25.4 bits (54), Expect(2) = 3e-14
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -1

Query: 188 EIVKLAAVRIIGMVEYSCLS 129
           +IVKL AVRI GMVE   LS
Sbjct: 745 KIVKLGAVRISGMVERLQLS 764


Top