BLASTX nr result

ID: Cephaelis21_contig00028221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028221
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...    82   6e-14
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...    80   2e-13
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...    80   2e-13
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...    78   9e-13
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...    78   9e-13

>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/78 (52%), Positives = 54/78 (69%)
 Frame = +1

Query: 1   QILGIAKLSGFFEWLSMHPIITSLDVEEATEETLSSQKMIIFAHHHNVCNRIQEFLWEKG 180
           Q LGIAKLSGF EWLS+HP+I+  D     +   SSQKMIIFAHH  V + +QEF+ EKG
Sbjct: 36  QELGIAKLSGFCEWLSIHPLISESDGVAKLDVNHSSQKMIIFAHHLKVLDGVQEFVHEKG 95

Query: 181 IEVIRINSHVSSFDRKEA 234
           +  +RI+ +  + DR+ A
Sbjct: 96  VGFVRIDGNTLASDRQNA 113


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
           endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/78 (52%), Positives = 52/78 (66%)
 Frame = +1

Query: 1   QILGIAKLSGFFEWLSMHPIITSLDVEEATEETLSSQKMIIFAHHHNVCNRIQEFLWEKG 180
           Q LGIAKLSGF EW S+HPII+  D     +    SQKMIIFAHHH V + +QE + EKG
Sbjct: 514 QELGIAKLSGFREWFSIHPIISESDGLMDLDLKTDSQKMIIFAHHHKVLDGLQELMCEKG 573

Query: 181 IEVIRINSHVSSFDRKEA 234
           I+ +RI+    + DR+ A
Sbjct: 574 IQFVRIDGTTLARDRQSA 591


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
           gi|223546303|gb|EEF47805.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1229

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   QILGIAKLSGFFEWLSMHPIITSLDVEEATEETLSSQKMIIFAHHHNVCNRIQEFLWEKG 180
           Q LGIAKL  F EWLS+HP+IT  D     +    SQKMIIFAHHH V + +QE ++EKG
Sbjct: 513 QELGIAKLPAFREWLSIHPLITESDGVAELDVNCISQKMIIFAHHHKVLDGVQELIFEKG 572

Query: 181 IEVIRINSHVSSFDRKEA 234
           I  +RI+ +    DR+ A
Sbjct: 573 IGFVRIDGNTLPRDRQSA 590


>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|332003824|gb|AED91207.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   QILGIAKLSGFFEWLSMHPIITSLD-VEEATEETLSSQKMIIFAHHHNVCNRIQEFLWEK 177
           Q LGIAKLS F EWLS+HP+++ LD   E  +   SS KM++FAHHH V + IQEF+ +K
Sbjct: 518 QQLGIAKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDK 577

Query: 178 GIEVIRINSHVSSFDRKEA 234
           GI  +RI+      DR+ A
Sbjct: 578 GIGFVRIDGTTLPRDRQLA 596


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319162|gb|EFH49584.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   QILGIAKLSGFFEWLSMHPIITSLD-VEEATEETLSSQKMIIFAHHHNVCNRIQEFLWEK 177
           Q LGIAKLS F EWLS+HP+++ LD   E  +   SS KM++FAHHH V + IQEF+ +K
Sbjct: 523 QQLGIAKLSAFREWLSLHPLLSGLDYTPEDIDGDTSSTKMVVFAHHHKVLDGIQEFMCDK 582

Query: 178 GIEVIRINSHVSSFDRKEA 234
           GI  +RI+      DR+ A
Sbjct: 583 GIGFVRIDGMTLPRDRQLA 601


Top