BLASTX nr result

ID: Cephaelis21_contig00028188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028188
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thalia...    68   7e-10
ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]...    65   6e-09
dbj|BAF01593.1| ARF1 family auxin responsive transcription facto...    65   6e-09
ref|XP_002303662.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica G...    64   1e-08

>ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
           gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin
           response factor 11 gi|4415934|gb|AAD20164.1| putative
           ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana] gi|20197827|gb|AAM15267.1|
           putative ARF1 family auxin responsive transcription
           factor [Arabidopsis thaliana] gi|49616357|gb|AAT67075.1|
           ARF11 [Arabidopsis thaliana] gi|330255622|gb|AEC10716.1|
           auxin response factor 11 [Arabidopsis thaliana]
          Length = 622

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +3

Query: 27  LVYVNFSATEQEDVMFTELWKAYSGPLVHIPRPGERVFYFPQGHMEQ 167
           L+ V ++    +D ++TELWKA +GPLV +PR GERVFYFPQGHMEQ
Sbjct: 25  LIAVGWNLGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQ 71


>ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
           gi|110739686|dbj|BAF01750.1| ARF1 family auxin
           responsive transcription factor like protein
           [Arabidopsis thaliana] gi|330255620|gb|AEC10714.1| auxin
           response factor 11 [Arabidopsis thaliana]
          Length = 601

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 60  EDVMFTELWKAYSGPLVHIPRPGERVFYFPQGHMEQ 167
           +D ++TELWKA +GPLV +PR GERVFYFPQGHMEQ
Sbjct: 15  DDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQ 50


>dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
          Length = 601

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 60  EDVMFTELWKAYSGPLVHIPRPGERVFYFPQGHMEQ 167
           +D ++TELWKA +GPLV +PR GERVFYFPQGHMEQ
Sbjct: 15  DDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQ 50


>ref|XP_002303662.1| predicted protein [Populus trichocarpa] gi|222841094|gb|EEE78641.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 60  EDVMFTELWKAYSGPLVHIPRPGERVFYFPQGHMEQ 167
           ED ++TELWKA +GPLV +P+ GERVFYFPQGHMEQ
Sbjct: 14  EDDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQ 49


>emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
          Length = 836

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 60  EDVMFTELWKAYSGPLVHIPRPGERVFYFPQGHMEQ--GHMQQVGLLSLHHFN 212
           ED +FTELW A +GPLV +PR GE+VFYFPQGH+EQ      QVG   +  +N
Sbjct: 18  EDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYN 70


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