BLASTX nr result

ID: Cephaelis21_contig00028172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028172
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512645.1| pentatricopeptide repeat-containing protein,...    98   8e-19
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...    95   5e-18
ref|XP_002871555.1| pentatricopeptide repeat-containing protein ...    95   5e-18
emb|CBI38188.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]    95   5e-18

>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 716

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = +1

Query: 82  EPGVSWIEHQGTIHYFLVGDASHPDRKLIQGMLEWLNLKSYAAGYIPNSDVILLDVEDDE 261
           EPG+SWIE+QG +HYF VGD SHPD K+I GMLEWLN+K+  AGY+P+ + +L DVEDDE
Sbjct: 581 EPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDE 640

Query: 262 K 264
           K
Sbjct: 641 K 641


>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +1

Query: 82  EPGVSWIEHQGTIHYFLVGDASHPDRKLIQGMLEWLNLKSYAAGYIPNSDVILLDVEDDE 261
           EPG+SWIE QGT+H F VGD SHP+ ++I GMLEWL++K+  AGYIPN +V+LLDVED+E
Sbjct: 476 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 535

Query: 262 K 264
           K
Sbjct: 536 K 536


>ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317392|gb|EFH47814.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 822

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = +1

Query: 82  EPGVSWIEHQGTIHYFLVGDASHPDRKLIQGMLEWLNLKSYAAGYIPNSDVILLDVEDDE 261
           EPG+SWIEHQG +H+F VG + HPD KLI GMLEWLN+K+  AGY+P+ + +LLD++D+E
Sbjct: 686 EPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEE 745

Query: 262 K 264
           K
Sbjct: 746 K 746


>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +1

Query: 82  EPGVSWIEHQGTIHYFLVGDASHPDRKLIQGMLEWLNLKSYAAGYIPNSDVILLDVEDDE 261
           EPG+SWIE QGT+H F VGD SHP+ ++I GMLEWL++K+  AGYIPN +V+LLDVED+E
Sbjct: 609 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 668

Query: 262 K 264
           K
Sbjct: 669 K 669


>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +1

Query: 82  EPGVSWIEHQGTIHYFLVGDASHPDRKLIQGMLEWLNLKSYAAGYIPNSDVILLDVEDDE 261
           EPG+SWIE QGT+H F VGD SHP+ ++I GMLEWL++K+  AGYIPN +V+LLDVED+E
Sbjct: 652 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 711

Query: 262 K 264
           K
Sbjct: 712 K 712


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