BLASTX nr result

ID: Cephaelis21_contig00028166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028166
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   167   8e-40
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   166   2e-39
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...   164   7e-39
ref|NP_171986.3| translocon at the inner envelope membrane of ch...   163   1e-38
ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabido...   163   1e-38

>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
           gi|302142547|emb|CBI19750.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/116 (64%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
 Frame = +3

Query: 3   PLRAAK-------HTVMTEKPKWWWRSLACLPYLLPLH-AWNYAETTYHIHPLLEDFEFL 158
           PLRA+K       +  MT+KP+WWWR+LACLPYL+PLH  W YAET YH+HP LEDFEF+
Sbjct: 98  PLRASKDVPYSFRYPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFV 157

Query: 159 TYPFRESLGRWPLWVLTIYPYVAYFGVAKKKEWPHFLRFHVMMAMLLEIGLQIIGT 326
           TYPF E +GR P W L  Y ++AY GV +KKEWPHF RFHV+M MLLEI LQ+IGT
Sbjct: 158 TYPFLEFIGRLPSWSLMAYFFIAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVIGT 213


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
           gi|223551137|gb|EEF52623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  166 bits (419), Expect = 2e-39
 Identities = 71/104 (68%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = +3

Query: 18  KHTVMTEKPKWWWRSLACLPYLLPLH-AWNYAETTYHIHPLLEDFEFLTYPFRESLGRWP 194
           ++  MT+KPKWWWR+LACLPYL+PLH  W YAET YH+HP LEDFEFLTYPF  ++GR P
Sbjct: 114 RYPPMTKKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLP 173

Query: 195 LWVLTIYPYVAYFGVAKKKEWPHFLRFHVMMAMLLEIGLQIIGT 326
            W L  Y +VAY GV ++KEWPHF RFHV+M MLLEI LQ+IGT
Sbjct: 174 SWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGT 217


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
           unknown [Populus trichocarpa]
           gi|222842476|gb|EEE80023.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score =  164 bits (415), Expect = 7e-39
 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
 Frame = +3

Query: 30  MTEKPKWWWRSLACLPYLLPLH-AWNYAETTYHIHPLLEDFEFLTYPFRESLGRWPLWVL 206
           MT+KP+WWWR+LACLPYL+PLH  W YAET YH+HP LEDFEFLTYPF  ++GR P W L
Sbjct: 114 MTKKPRWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL 173

Query: 207 TIYPYVAYFGVAKKKEWPHFLRFHVMMAMLLEIGLQIIGT 326
             Y +VAY GV ++KEWPHF RFHV+M MLLEI LQ+IGT
Sbjct: 174 MAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGT 213


>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
           [Arabidopsis thaliana]
           gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
           Full=Protein TIC 20-I, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
           gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
           thaliana] gi|332189644|gb|AEE27765.1| translocon at the
           inner envelope membrane of chloroplasts 20 [Arabidopsis
           thaliana]
          Length = 274

 Score =  163 bits (413), Expect = 1e-38
 Identities = 69/100 (69%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
 Frame = +3

Query: 30  MTEKPKWWWRSLACLPYLLPLH-AWNYAETTYHIHPLLEDFEFLTYPFRESLGRWPLWVL 206
           MT+KP+WWWR+LACLPYL+PLH  W YAET YH+HP LEDFEFLTYPF  ++GR P W L
Sbjct: 116 MTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL 175

Query: 207 TIYPYVAYFGVAKKKEWPHFLRFHVMMAMLLEIGLQIIGT 326
             Y +VAY G+ ++KEWPHF RFHV+M MLLEI LQ+IGT
Sbjct: 176 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGT 215


>ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|332189643|gb|AEE27764.1| HIT-type Zinc finger family
           protein [Arabidopsis thaliana]
          Length = 644

 Score =  163 bits (413), Expect = 1e-38
 Identities = 69/100 (69%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
 Frame = +3

Query: 30  MTEKPKWWWRSLACLPYLLPLH-AWNYAETTYHIHPLLEDFEFLTYPFRESLGRWPLWVL 206
           MT+KP+WWWR+LACLPYL+PLH  W YAET YH+HP LEDFEFLTYPF  ++GR P W L
Sbjct: 116 MTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL 175

Query: 207 TIYPYVAYFGVAKKKEWPHFLRFHVMMAMLLEIGLQIIGT 326
             Y +VAY G+ ++KEWPHF RFHV+M MLLEI LQ+IGT
Sbjct: 176 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGT 215


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