BLASTX nr result

ID: Cephaelis21_contig00028068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028068
         (1493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154877.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    59   3e-06
ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    59   3e-06

>ref|XP_004154877.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Cucumis sativus]
          Length = 469

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 4/216 (1%)
 Frame = +2

Query: 182 WMPCNFSLHSSRYQNLNTLVLSAVGIGDGFFNNFAYMFPNVEDLSIQYCHNLQIVKLSSQ 361
           + PC  ++ S +  NL TL LS V I D +FN     FP +E L++ YCH L+ +++SS 
Sbjct: 234 FQPCCINISSCK--NLKTLKLSMVAITDDWFNRCFSEFPLLEILALSYCHMLESLRISSS 291

Query: 362 SIKRFGLSENRELKEAHFDLPRIVYFEFRSGEEFAPILSFTALSGGWV--SSLYIDYWYG 535
            +K+F L     +     D P +   EF SG+  +  L+  ALS   +  S    D  + 
Sbjct: 292 HLKKFILCGCESVTRVDIDTPCLSGLEF-SGDVISFSLNAPALSQADIELSPRIFDNPWV 350

Query: 536 YEALNPSLWFRKLKVLLSGLYQSEILLRITLQGIRIPKFNAEEIKNMFACSKPVMVEELS 715
            + +     F  LK L     QS+     T + + IP    +E++  F  S    V+ L 
Sbjct: 351 VKQIEFLAHFNHLKSL---TLQSQ-----TGKSVVIP----QELRETFG-SPLYGVKHLK 397

Query: 716 VNFSQESMSSTL-SILDSIFWIC-RPRSIIYQQGLG 817
           +   +   S +L  ++ ++ WI  +P++I  + G G
Sbjct: 398 LRIIKPLFSPSLKDLVKALLWIAPQPQTIAVESGFG 433


>ref|XP_004146859.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Cucumis sativus]
          Length = 469

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 4/216 (1%)
 Frame = +2

Query: 182 WMPCNFSLHSSRYQNLNTLVLSAVGIGDGFFNNFAYMFPNVEDLSIQYCHNLQIVKLSSQ 361
           + PC  ++ S +  NL TL LS V I D +FN     FP +E L++ YCH L+ +++SS 
Sbjct: 234 FQPCCINISSCK--NLKTLKLSMVAITDDWFNRCFSEFPLLEILALSYCHMLESLRISSS 291

Query: 362 SIKRFGLSENRELKEAHFDLPRIVYFEFRSGEEFAPILSFTALSGGWV--SSLYIDYWYG 535
            +K+F L     +     D P +   EF SG+  +  L+  ALS   +  S    D  + 
Sbjct: 292 HLKKFILCGCESVTRVDIDAPCLSGLEF-SGDVISFSLNAPALSQADIELSPRIFDNPWV 350

Query: 536 YEALNPSLWFRKLKVLLSGLYQSEILLRITLQGIRIPKFNAEEIKNMFACSKPVMVEELS 715
            + +     F  LK L     QS+     T + + IP    +E++  F  S    V+ L 
Sbjct: 351 VKQIEFLAHFNHLKSL---TLQSQ-----TGKSVVIP----QELRETFG-SPLYGVKHLK 397

Query: 716 VNFSQESMSSTL-SILDSIFWIC-RPRSIIYQQGLG 817
           +   +   S +L  ++ ++ WI  +P++I  + G G
Sbjct: 398 LRIIKPLFSPSLKDLVKALLWIAPQPQTIAVESGFG 433


Top