BLASTX nr result

ID: Cephaelis21_contig00028006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028006
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta typ...   116   5e-49
gb|AFK36140.1| unknown [Medicago truncatula]                          112   9e-49
ref|XP_002511724.1| proteasome subunit beta type, putative [Rici...   109   4e-46
ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-li...   107   2e-45
emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]             105   1e-42

>sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit beta-6 gi|3608485|gb|AAC35983.1| proteasome beta
           subunit [Petunia x hybrida]
          Length = 223

 Score =  116 bits (291), Expect(2) = 5e-49
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +2

Query: 401 SSQGFGSTLIMPILDNQLKSPSPLLLSAQDAVTPLSEAEAIDLVKTCFASATERDIYTGD 580
           SSQG GSTLIMP LDNQLKSPSPLLL AQDAVTPLSEAEAIDLVKTCFASATERDIYTGD
Sbjct: 142 SSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGD 201

Query: 581 KLE 589
           +LE
Sbjct: 202 RLE 204



 Score =  103 bits (257), Expect(2) = 5e-49
 Identities = 62/129 (48%), Positives = 76/129 (58%), Gaps = 18/129 (13%)
 Frame = +3

Query: 69  MTIQQANWSPYEKNGRTCVAIAGADYCVIAADKRMSTGYNVLTRDHSKVSHL-QMCIGFF 245
           MT QQANWSPY+ NG TCVA+AGADYCVIAAD RMSTGYN+LTRD+SK+  L   C+   
Sbjct: 1   MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCV--- 57

Query: 246 WISG*Y*SFAKALGR*ASDLSASAQQLDDHTGNGSTS-----------------VPYYAF 374
             S  + +  +AL +    + AS   +  H  N   S                  PYY+F
Sbjct: 58  MASSGFQADVRALQK----VLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113

Query: 375 NVLGGLDSQ 401
           NVLGGLDS+
Sbjct: 114 NVLGGLDSE 122


>gb|AFK36140.1| unknown [Medicago truncatula]
          Length = 237

 Score =  112 bits (280), Expect(2) = 9e-49
 Identities = 57/63 (90%), Positives = 59/63 (93%)
 Frame = +2

Query: 401 SSQGFGSTLIMPILDNQLKSPSPLLLSAQDAVTPLSEAEAIDLVKTCFASATERDIYTGD 580
           SSQG GSTLIMP LDNQLKSPSPLLL AQDAVTPLSEAEA+DLVKT FASATERDIYTGD
Sbjct: 142 SSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGD 201

Query: 581 KLE 589
           K+E
Sbjct: 202 KVE 204



 Score =  107 bits (266), Expect(2) = 9e-49
 Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 14/125 (11%)
 Frame = +3

Query: 69  MTIQQANWSPYEKNGRTCVAIAGADYCVIAADKRMSTGYNVLTRDHSKVSHL-QMCIGFF 245
           MT Q ANWSPY+ NG +CVAIAG+DYCVIAAD RMSTGYN+LTRD+SK+SHL + C+   
Sbjct: 1   MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCV--- 57

Query: 246 WISG*Y*SFAKALGR*ASDLSASAQ-------------QLDDHTGNGSTSVPYYAFNVLG 386
             S  + +  KAL +  S    + Q             QL  +T       PYY+FNVLG
Sbjct: 58  MASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLG 117

Query: 387 GLDSQ 401
           GLDS+
Sbjct: 118 GLDSE 122


>ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
           gi|223548904|gb|EEF50393.1| proteasome subunit beta
           type, putative [Ricinus communis]
          Length = 223

 Score =  109 bits (272), Expect(2) = 4e-46
 Identities = 55/63 (87%), Positives = 58/63 (92%)
 Frame = +2

Query: 401 SSQGFGSTLIMPILDNQLKSPSPLLLSAQDAVTPLSEAEAIDLVKTCFASATERDIYTGD 580
           S+QG GSTLIMP LDNQLKSPSPLLL AQDAVTPLSE EA+DLVKT FASATERDIYTGD
Sbjct: 142 SAQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEPEAVDLVKTVFASATERDIYTGD 201

Query: 581 KLE 589
           K+E
Sbjct: 202 KVE 204



 Score =  101 bits (251), Expect(2) = 4e-46
 Identities = 62/124 (50%), Positives = 75/124 (60%), Gaps = 13/124 (10%)
 Frame = +3

Query: 69  MTIQQANWSPYEKNGRTCVAIAGADYCVIAADKRMSTGYNVLTRDHSKVSHLQMCIGFFW 248
           MT QQANWSPY+ NG +CVAIAGADYCVIAAD RMSTGYN+LTRD+SK+   Q+      
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKI--CQLAEKSVM 58

Query: 249 ISG*Y*SFAKALGR*A------------SDLSASAQ-QLDDHTGNGSTSVPYYAFNVLGG 389
            S  + +  +AL +                +S  A  QL  +T       PYYAFNVLGG
Sbjct: 59  ASSGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGG 118

Query: 390 LDSQ 401
           LDS+
Sbjct: 119 LDSE 122


>ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
          Length = 223

 Score =  107 bits (266), Expect(2) = 2e-45
 Identities = 55/63 (87%), Positives = 57/63 (90%)
 Frame = +2

Query: 401 SSQGFGSTLIMPILDNQLKSPSPLLLSAQDAVTPLSEAEAIDLVKTCFASATERDIYTGD 580
           S+QG GSTLI P LDNQLKSPSPLLL AQD+ TPLSEAEAIDLVKT FASATERDIYTGD
Sbjct: 142 SAQGSGSTLITPFLDNQLKSPSPLLLPAQDSSTPLSEAEAIDLVKTVFASATERDIYTGD 201

Query: 581 KLE 589
           KLE
Sbjct: 202 KLE 204



 Score =  101 bits (251), Expect(2) = 2e-45
 Identities = 61/122 (50%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
 Frame = +3

Query: 69  MTIQQANWSPYEKNGRTCVAIAGADYCVIAADKRMSTGYNVLTRDHSKVSHL--QMCIGF 242
           MT QQANWSPY+ NG +CVAIAGADYCVIAAD R+STGYN+LTRD+SK+  L  +  +  
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLAS 60

Query: 243 FWISG*Y*SFAKALG--------R*ASDLSASAQ-QLDDHTGNGSTSVPYYAFNVLGGLD 395
                   +  KAL         +    +S  A  QL  +T       PYYAFNVLGGLD
Sbjct: 61  SGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 120

Query: 396 SQ 401
           S+
Sbjct: 121 SE 122


>emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
          Length = 230

 Score =  105 bits (261), Expect(2) = 1e-42
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = +2

Query: 404 SQGFGSTLIMPILDNQLKSPSPLLLSAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDK 583
           +QG GSTLIMP LDNQLKSPSPLLL  QD+ TPLSEAEA+DLVKT FASATERDIYTGDK
Sbjct: 150 AQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDK 209

Query: 584 LE 589
           LE
Sbjct: 210 LE 211



 Score = 94.0 bits (232), Expect(2) = 1e-42
 Identities = 58/124 (46%), Positives = 73/124 (58%), Gaps = 13/124 (10%)
 Frame = +3

Query: 69  MTIQQANWSPYEKNGRTCVAIAGADYCVIAADKRMSTGYNVLTRDHSKVSHLQMCIGFFW 248
           MT Q ANWSPY+ NG TCVAIAG+DYCVIAAD RMSTGY++L+RD+SK+   ++      
Sbjct: 8   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIH--KLADRAVL 65

Query: 249 ISG*Y*SFAKALGR*A------------SDLSASAQ-QLDDHTGNGSTSVPYYAFNVLGG 389
            S  + +  KAL +                +S  A  QL  +T       PYYAFNVLGG
Sbjct: 66  SSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGG 125

Query: 390 LDSQ 401
           LD +
Sbjct: 126 LDEE 129


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