BLASTX nr result

ID: Cephaelis21_contig00027680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027680
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   122   3e-26
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   119   2e-25
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  122 bits (306), Expect = 3e-26
 Identities = 52/75 (69%), Positives = 61/75 (81%)
 Frame = -3

Query: 225 QVQLKPWLDPAALASALQHWRPEEVSTLEDAKVIWTTRLVCKMIRSFKSAEISWQFFCWV 46
           +V+LKPWLDP ALA+AL  W PE VS LEDAK +WTTRLVCK++R+F S E +W FFCWV
Sbjct: 339 EVRLKPWLDPKALANALSQWSPEVVSMLEDAKFVWTTRLVCKVLRNFSSPETAWYFFCWV 398

Query: 45  ASQPGFTHDIYTTSR 1
           A QPGFTHD+YT  R
Sbjct: 399 AYQPGFTHDVYTVQR 413


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  119 bits (299), Expect = 2e-25
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = -3

Query: 222 VQLKPWLDPAALASALQHWRPEEVSTLEDAKVIWTTRLVCKMIRSFKSAEISWQFFCWVA 43
           ++LKPWLDP +LASALQ+W P+EVS LE A  +WTTRLVCK++RSF+S + +W FFCWVA
Sbjct: 347 IRLKPWLDPRSLASALQNWSPDEVSALEGANFVWTTRLVCKILRSFRSPDTAWNFFCWVA 406

Query: 42  SQPGFTHDIYTTSR 1
            +PGFTH+IYT  R
Sbjct: 407 DRPGFTHNIYTVQR 420


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -3

Query: 222 VQLKPWLDPAALASALQHWRPEEVSTLEDAKVIWTTRLVCKMIRSFKSAEISWQFFCWVA 43
           + LKPW+DP AL SAL++W P+EV+ LE A  +WTTRLVCKM+R+FK+ E +W FFCW A
Sbjct: 350 IHLKPWMDPRALVSALRNWSPDEVAALESANFVWTTRLVCKMLRNFKTPEAAWSFFCWAA 409

Query: 42  SQPGFTHDIYTTSR 1
           +Q GFTHDIYT  R
Sbjct: 410 NQRGFTHDIYTVQR 423


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
 Frame = -3

Query: 222 VQLKPWLDPAALASALQHWRPEEVSTLEDAKVIWTTRLVCKMIRSFKSAEISWQFFCWVA 43
           VQLKPWLDP ALA+AL +W P EV  LE+AK IWTTRLVCK++R+F S E +W+FFCWVA
Sbjct: 336 VQLKPWLDPRALANALNNWDPNEVLALEEAKFIWTTRLVCKILRNFNSPETAWKFFCWVA 395

Query: 42  SQP-GFTHDIYTTSR 1
            QP GF H+IYT  R
Sbjct: 396 YQPGGFNHNIYTVQR 410


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = -3

Query: 225 QVQLKPWLDPAALASALQHWRPEEVSTLEDAKVIWTTRLVCKMIRSFKSAEISWQFFCWV 46
           +V+LKPWLDP ALA AL  W P+ VS LEDAK +WTTRLV K++R+  S E +W FFCWV
Sbjct: 203 EVRLKPWLDPRALAKALNKWSPDVVSALEDAKFVWTTRLVWKVLRNINSPETAWDFFCWV 262

Query: 45  ASQPGFTHDIYTTSR 1
           A QPGFTH +YT  R
Sbjct: 263 AYQPGFTHCVYTVQR 277


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