BLASTX nr result

ID: Cephaelis21_contig00026992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026992
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG31651.1| PRLI-interacting factor K [Arabidopsis thaliana]       209   4e-52
ref|XP_002529342.1| ubiquitin fusion degradaton protein, putativ...   209   4e-52
ref|NP_567465.1| ubiquitin fusion degradation UFD1 family protei...   209   5e-52
ref|XP_002321140.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002273297.1| PREDICTED: uncharacterized protein LOC100246...   206   4e-51

>gb|AAG31651.1| PRLI-interacting factor K [Arabidopsis thaliana]
          Length = 574

 Score =  209 bits (533), Expect = 4e-52
 Identities = 104/182 (57%), Positives = 135/182 (74%), Gaps = 1/182 (0%)
 Frame = +3

Query: 243 EMDFELRRAREKLEGEQRERKQRAQLKLEREKRARDAAVRQREAIEAAQSRRRLDXXXXX 422
           +MDFELR A+EKLE EQRERKQRA+LKLEREK++++AA++QREAIEAAQ  RRLD     
Sbjct: 13  KMDFELRSAKEKLEREQRERKQRAKLKLEREKKSKEAAIKQREAIEAAQRARRLDAIEAQ 72

Query: 423 XXXXXXXXXXXXXGRGVIFRRILQAVPYEANGDKIKLPPSCFTELSEQGAFEKGPLHFSL 602
                        G G++F R+ QAV ++ NGDKIKLPPSCFTELS+QGAF+KGPL+F L
Sbjct: 73  IKADQHMQESLVSGDGIVFERVFQAVSFQGNGDKIKLPPSCFTELSDQGAFDKGPLYFEL 132

Query: 603 SLVGGEDSGNQENRITHAGVLEFTSDEDFVGLPPHVWNNLVAADSP-QLPMVLVRYVFLP 779
           S+V   D+     + TH+GVLEFT+++  +GLPPHVW+NL +   P  +P+V +RY+ LP
Sbjct: 133 SVVDHADN----KKTTHSGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLP 188

Query: 780 KG 785
           KG
Sbjct: 189 KG 190


>ref|XP_002529342.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
           gi|223531213|gb|EEF33059.1| ubiquitin fusion degradaton
           protein, putative [Ricinus communis]
          Length = 570

 Score =  209 bits (533), Expect = 4e-52
 Identities = 105/185 (56%), Positives = 136/185 (73%), Gaps = 5/185 (2%)
 Frame = +3

Query: 246 MDFELRRAREKLEGEQRERKQRAQLKLEREKRARDAAVRQREAIEAAQSRRRLDXXXXXX 425
           MDFELRRAREKLE EQ++RK++A+L+LERE++A+D A +QREAIEAAQ  RRLD      
Sbjct: 1   MDFELRRAREKLEKEQKDRKEKARLRLERERKAKDEAKKQREAIEAAQRSRRLDAIQAQI 60

Query: 426 XXXXXXXXXXXXGRGVIFRRILQAVPYEANGDKIKLPPSCFTELSEQGAFEKGPLHFSLS 605
                       GRG+ F  IL+AVP++ NGDKIKLP SCFTELS+QGAF+KGP++F LS
Sbjct: 61  KADEQMQENLIAGRGIAFSCILEAVPFQGNGDKIKLPSSCFTELSDQGAFDKGPIYFQLS 120

Query: 606 LVGGEDSG-----NQENRITHAGVLEFTSDEDFVGLPPHVWNNLVAADSPQLPMVLVRYV 770
           ++  E S      + E +ITH+GVLEFT++E  VGLPPHVWNNL  +   ++P+V +RY 
Sbjct: 121 VIHQEGSSEMKTTDSEQKITHSGVLEFTAEEGSVGLPPHVWNNLFPSGPLEVPLVEIRYR 180

Query: 771 FLPKG 785
           +LPKG
Sbjct: 181 WLPKG 185


>ref|NP_567465.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
           thaliana] gi|17933289|gb|AAL48228.1|AF446353_1
           AT4g15420/dl3755w [Arabidopsis thaliana]
           gi|21554166|gb|AAM63245.1| UFD1 like protein
           [Arabidopsis thaliana] gi|23506013|gb|AAN28866.1|
           At4g15420/dl3755w [Arabidopsis thaliana]
           gi|111609946|gb|ABH11523.1| UFD1d [Arabidopsis thaliana]
           gi|332658201|gb|AEE83601.1| ubiquitin fusion degradation
           UFD1 family protein [Arabidopsis thaliana]
          Length = 561

 Score =  209 bits (532), Expect = 5e-52
 Identities = 104/181 (57%), Positives = 134/181 (74%), Gaps = 1/181 (0%)
 Frame = +3

Query: 246 MDFELRRAREKLEGEQRERKQRAQLKLEREKRARDAAVRQREAIEAAQSRRRLDXXXXXX 425
           MDFELR A+EKLE EQRERKQRA+LKLEREK++++AA++QREAIEAAQ  RRLD      
Sbjct: 1   MDFELRSAKEKLEREQRERKQRAKLKLEREKKSKEAAIKQREAIEAAQRARRLDAIEAQI 60

Query: 426 XXXXXXXXXXXXGRGVIFRRILQAVPYEANGDKIKLPPSCFTELSEQGAFEKGPLHFSLS 605
                       G G++F R+ QAV ++ NGDKIKLPPSCFTELS+QGAF+KGPL+F LS
Sbjct: 61  KADQHMQESLVSGDGIVFERVFQAVSFQGNGDKIKLPPSCFTELSDQGAFDKGPLYFELS 120

Query: 606 LVGGEDSGNQENRITHAGVLEFTSDEDFVGLPPHVWNNLVAADSP-QLPMVLVRYVFLPK 782
           +V   D+     + TH+GVLEFT+++  +GLPPHVW+NL +   P  +P+V +RY+ LPK
Sbjct: 121 VVDHADN----KKTTHSGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPK 176

Query: 783 G 785
           G
Sbjct: 177 G 177


>ref|XP_002321140.1| predicted protein [Populus trichocarpa] gi|222861913|gb|EEE99455.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  207 bits (528), Expect = 2e-51
 Identities = 104/185 (56%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
 Frame = +3

Query: 246 MDFELRRAREKLEGEQRERKQRAQLKLEREKRARDAAVRQREAIEAAQSRRRLDXXXXXX 425
           MDFELRRAREKLE EQ+ERK+RA+L+L+RE++A++ A +QREAIEA    RRLD      
Sbjct: 1   MDFELRRAREKLEKEQKERKERAKLRLDRERKAKEEARKQREAIEAVHRSRRLDAIQAQL 60

Query: 426 XXXXXXXXXXXXGRGVIFRRILQAVPYEANGDKIKLPPSCFTELSEQGAFEKGPLHFSLS 605
                       GRG++F RIL+AV ++ +GDKIKLPPSCFT LS+QGAF+KGPL+F LS
Sbjct: 61  KVDEQMQENLLAGRGIVFSRILEAVSFQGSGDKIKLPPSCFTGLSDQGAFDKGPLYFQLS 120

Query: 606 LVGGEDSG-----NQENRITHAGVLEFTSDEDFVGLPPHVWNNLVAADSPQLPMVLVRYV 770
           +V  E S      + +   TH+GVLEFT++E  VGLPPHVW+NL   DSP+ P++ V+YV
Sbjct: 121 VVHQEGSSEMIDTDSKQSTTHSGVLEFTAEEGSVGLPPHVWSNLFPIDSPKAPLIEVQYV 180

Query: 771 FLPKG 785
           +LPKG
Sbjct: 181 WLPKG 185


>ref|XP_002273297.1| PREDICTED: uncharacterized protein LOC100246609 [Vitis vinifera]
          Length = 569

 Score =  206 bits (525), Expect = 4e-51
 Identities = 107/186 (57%), Positives = 133/186 (71%), Gaps = 6/186 (3%)
 Frame = +3

Query: 246 MDFELRRAREKLEGEQRERKQRAQLKLEREKRARDAAVRQREAIEAAQSRRRLDXXXXXX 425
           MDFELRRAREKLE EQ+ERK++A+LKLER+++++  A RQR+AIEA Q  RRLD      
Sbjct: 1   MDFELRRAREKLEREQKERKEKARLKLERDRKSKQEAARQRDAIEAVQRSRRLDAAEAQL 60

Query: 426 XXXXXXXXXXXXGRGVIFRRILQAVPYEANGDKIKLPPSCFTELSEQGAFEKGPLHFSLS 605
                       GRGV+F RIL+AV Y+ NGDKIKLPPSCF ELS+QGAF+KGPL+F LS
Sbjct: 61  KADQQMEESLLAGRGVMFFRILEAVAYQGNGDKIKLPPSCFKELSDQGAFDKGPLYFGLS 120

Query: 606 LVGGEDS------GNQENRITHAGVLEFTSDEDFVGLPPHVWNNLVAADSPQLPMVLVRY 767
           +V  E S        Q  R THAGVLEFT++E  V LPPHVW+NL   ++ + P+V VRY
Sbjct: 121 VVHQEGSLDTKAAETQNQRTTHAGVLEFTAEEGSVSLPPHVWSNLFPEETLKSPLVEVRY 180

Query: 768 VFLPKG 785
           ++LPKG
Sbjct: 181 LWLPKG 186


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