BLASTX nr result

ID: Cephaelis21_contig00026901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026901
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   201   4e-49
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   194   5e-47
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   194   6e-47
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-44
ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-43

>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  201 bits (511), Expect = 4e-49
 Identities = 94/163 (57%), Positives = 124/163 (76%)
 Frame = +3

Query: 3   TIMHGLCKRGHIDDAFMVLDRMESDGVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLK 182
           T+MH LC +G ++ AF +LDRME++G+E D +TFNILISGLR +GR+EEG++L  KM LK
Sbjct: 178 TLMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLK 237

Query: 183 GCDPNPGTYQEVLYGLLDAKKFADAKEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEV 362
           GC+PN G+YQEVLYGLLDA KF++AK+FM RM+ +   PSF SYK  I G C E L+GEV
Sbjct: 238 GCEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEV 297

Query: 363 EWALKQMVRQGFVPKKGMWKCILQCLFSGSNTCHSFPYEEIVG 491
           +  LKQM++QGFVPK GMWK I+  + S S  C S  + +++G
Sbjct: 298 DCVLKQMLKQGFVPKMGMWKHIVGSMLSESGDCTSICFSQVIG 340


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  194 bits (493), Expect = 5e-47
 Identities = 95/161 (59%), Positives = 117/161 (72%)
 Frame = +3

Query: 3   TIMHGLCKRGHIDDAFMVLDRMESDGVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLK 182
           T+MHGLC+ G ++ A  +L+RME +GV PD V FNILISGLR +GRVEEG++L  +M LK
Sbjct: 232 TLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLK 291

Query: 183 GCDPNPGTYQEVLYGLLDAKKFADAKEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEV 362
           GC PN G+YQEVLYG+LD  +F  AKEFMC+MI + V PSF SYK  I G C ENLV +V
Sbjct: 292 GCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVADV 351

Query: 363 EWALKQMVRQGFVPKKGMWKCILQCLFSGSNTCHSFPYEEI 485
            W LKQMV QGFVP++ MW+ ILQ +F   N   S   EE+
Sbjct: 352 VWILKQMVEQGFVPERWMWRRILQTMFP-RNVSQSEIMEEV 391



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 37/118 (31%), Positives = 57/118 (48%)
 Frame = +3

Query: 78  GVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLKGCDPNPGTYQEVLYGLLDAKKFADA 257
           GVE DA   NIL+ GL   G V+   +L D+   + C PN  T+  +++GL ++ +   A
Sbjct: 187 GVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGA 246

Query: 258 KEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEVEWALKQMVRQGFVPKKGMWKCIL 431
              + RM R+ VYP    +   I G      V E    L +M  +G  P  G ++ +L
Sbjct: 247 LGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVL 304


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  194 bits (492), Expect = 6e-47
 Identities = 95/161 (59%), Positives = 117/161 (72%)
 Frame = +3

Query: 3   TIMHGLCKRGHIDDAFMVLDRMESDGVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLK 182
           T+MHGLC+ G ++ A  +L+RME +GV PD V FNILISGLR +GRVEEG++L  +M LK
Sbjct: 232 TLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLK 291

Query: 183 GCDPNPGTYQEVLYGLLDAKKFADAKEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEV 362
           GC PN G+YQEVLYG+LD  +F  AKEFMC+MI + V PSF SYK  I G C ENLV +V
Sbjct: 292 GCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADV 351

Query: 363 EWALKQMVRQGFVPKKGMWKCILQCLFSGSNTCHSFPYEEI 485
            W LKQMV QGFVP++ MW+ ILQ +F   N   S   EE+
Sbjct: 352 VWILKQMVEQGFVPERWMWRRILQTMFP-RNVSQSEIMEEV 391



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 37/118 (31%), Positives = 57/118 (48%)
 Frame = +3

Query: 78  GVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLKGCDPNPGTYQEVLYGLLDAKKFADA 257
           GVE DA   NIL+ GL   G V+   +L D+   + C PN  T+  +++GL ++ +   A
Sbjct: 187 GVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGA 246

Query: 258 KEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEVEWALKQMVRQGFVPKKGMWKCIL 431
              + RM R+ VYP    +   I G      V E    L +M  +G  P  G ++ +L
Sbjct: 247 LGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVL 304


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  186 bits (471), Expect = 2e-44
 Identities = 87/153 (56%), Positives = 111/153 (72%)
 Frame = +3

Query: 3   TIMHGLCKRGHIDDAFMVLDRMESDGVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLK 182
           T++HGLC+ G +  A  +  +ME++GV PD +TFNILISGLR K R+EE I+L  +M LK
Sbjct: 238 TLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLK 297

Query: 183 GCDPNPGTYQEVLYGLLDAKKFADAKEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEV 362
           GC PN GTYQEVLYGLLD  KF +A++ M RMI + + PSF SYK  + G C + L  +V
Sbjct: 298 GCYPNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDV 357

Query: 363 EWALKQMVRQGFVPKKGMWKCILQCLFSGSNTC 461
           +W LKQMV QGFVPK GMWK IL+C+ SG+  C
Sbjct: 358 DWVLKQMVMQGFVPKVGMWKVILRCMLSGNEEC 390



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 34/118 (28%), Positives = 58/118 (49%)
 Frame = +3

Query: 78  GVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLKGCDPNPGTYQEVLYGLLDAKKFADA 257
           G+E DA   NIL+ GL   G ++  +K+ D+   + C PN  T+  +L+GL +  +   A
Sbjct: 193 GIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRA 252

Query: 258 KEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEVEWALKQMVRQGFVPKKGMWKCIL 431
            E  C+M  + V P   ++   I G   +  + E    L +M  +G  P  G ++ +L
Sbjct: 253 LELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVL 310


>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  183 bits (464), Expect = 1e-43
 Identities = 80/135 (59%), Positives = 109/135 (80%)
 Frame = +3

Query: 3   TIMHGLCKRGHIDDAFMVLDRMESDGVEPDAVTFNILISGLRTKGRVEEGIKLFDKMMLK 182
           T+MHGLCK+G +D+AF +L+RME +G++ D +TFNILISGLR +G+V EG++L ++M +K
Sbjct: 191 TLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLERMNIK 250

Query: 183 GCDPNPGTYQEVLYGLLDAKKFADAKEFMCRMIRKNVYPSFESYKFAIQGFCSENLVGEV 362
           GC+PN G+YQE+LYGLLDA+K+ + KEFM RMI + V PSF SYK  + G C E L+ ++
Sbjct: 251 GCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHGLCKERLLRDL 310

Query: 363 EWALKQMVRQGFVPK 407
           +W LKQM RQGFVPK
Sbjct: 311 DWVLKQMARQGFVPK 325


Top