BLASTX nr result
ID: Cephaelis21_contig00026838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00026838
(641 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japo... 48 4e-08
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 43 4e-07
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis... 40 2e-06
dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like ... 47 2e-06
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] 44 2e-06
>gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japonica Group]
Length = 408
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Frame = +1
Query: 40 RLSTLLRSLLAFVLWGLWRVRYSYLFDAQTPRISSAMRIILPLLLSVASQTLSPAV---- 207
+LS + R + +LW +W VR + D + I + R ++ + S+ P
Sbjct: 157 KLSEMERMFILMLLWRIWHVRNEVVHDKRPAPIEVSKRFLVSYVDSLLGIRQHPTKDIHK 216
Query: 208 -KSPLCVR-------------------WLFPPSTCIKANVDGSANGNPGLSGAGIVLRNE 327
K +C + W+ PP K NVDGS N + G +G G++LRN
Sbjct: 217 GKGVICYQLRNSSRQGGSERSQGTDEAWVRPPPGWSKLNVDGSFNNSSGQAGIGMILRNS 276
Query: 328 YG 333
G
Sbjct: 277 EG 278
Score = 35.4 bits (80), Expect(2) = 4e-08
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 GLVLAINLRVLPLAMETDSVLLIKWFQYEIA*PWRYLYILWKIIDLLQ--HYDISAVHIF 571
GL LA++ +LP+ +ETDS+L + + R+ Y++ + + LLQ ++ +
Sbjct: 305 GLDLALHWSILPIILETDSILAVSAINGKTEDKSRFAYLI-RELRLLQKGEREVKVQKVH 363
Query: 572 REASSVADGLARVASLSQRSQLF 640
R+ + ++ LA A ++ RS +
Sbjct: 364 RDHNKISHVLANSARVANRSDFW 386
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 43.1 bits (100), Expect(2) = 4e-07
Identities = 30/106 (28%), Positives = 52/106 (49%)
Frame = +2
Query: 320 GMNMVVS*QPSILLWDMGLMSRLFYEGLVLAINLRVLPLAMETDSVLLIKWFQYEIA*PW 499
G + +S ILL ++ + ++GL++A + + LA +DS+L I +
Sbjct: 1170 GYSGFISESTDILLAELTAL----HQGLIMAAEMGIEELACYSDSLLTINLITRTTSKYH 1225
Query: 500 RYLYILWKIIDLLQHYDISAVHIFREASSVADGLARVASLSQRSQL 637
Y ++ I DLL ++ S H FRE + AD LA++ + S L
Sbjct: 1226 TYAVLIQDIKDLLSAHNFSVYHCFREGNQCADYLAKLGASSNEECL 1271
Score = 36.6 bits (83), Expect(2) = 4e-07
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 1 FGLLLIQDWWVAPRLSTLLRSLLAFV-LWGLWRVRYSYLFDAQT---PRISSAMRIILPL 168
F + +QDW S+ R++ LW WR R +T RIS + +
Sbjct: 1053 FSVSSVQDW--IRNFSSGSRAITFLAGLWWSWRHRNLMCLSNETWPLTRISFRINDSINA 1110
Query: 169 LLS--VASQTLSPAVKSPLCVRWLFPPSTCIKANVDGSANGNPGLSGAGIVLRNEYGCFL 342
+ S V S + P S V+W C NVDGS G P +G G + RN G +L
Sbjct: 1111 IRSAFVKSNVIQP--DSARMVKWNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYL 1168
Query: 343 A 345
+
Sbjct: 1169 S 1169
>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
Length = 1155
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +2
Query: 398 GLVLAINLRVLPLAMETDSVLLIKWFQYEIA*PWRYLYILWKIIDLLQHYDISAVHIFRE 577
G+ L I V + ETDS+LL K + PWR + KI +++ + H RE
Sbjct: 1050 GMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLRE 1109
Query: 578 ASSVADGLARVASLSQRSQLF 640
A+ AD LA ++ + + +F
Sbjct: 1110 ANQPADKLASISLSTDVNHVF 1130
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 208 KSPLCVRWLFPPSTCIKANVDGSANGNPGLSGAGIVLRNEYGCFLAAKYIALGYGSN 378
K+ + V W+ PP+ K N DGS G G G +LRN G + A I LG G++
Sbjct: 985 KNVIRVNWIKPPTMFAKLNTDGSCVN--GRCGGGGILRNALGQVIMAFTIKLGEGTS 1039
>dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 308
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 61 SLLAFVLWGLWRVRYSYLFDAQTPRISSAMRIILPLLLSVASQTLSPAV------KSPLC 222
++ A ++W W+ R S +F T + ++ + ++ V L A+ +
Sbjct: 79 TIFAVIIWWGWKWRCSNIFGENT-KCRDRVKFVKEWVVEVYRAHLGNALVGSTQPRVERL 137
Query: 223 VRWLFPPSTCIKANVDGSANGNPGLSGAGIVLRNEYGCFLAAKYIALGYGSNVKAFLRG 399
+ W+ P +K N DG++ GNPGL+ AG VLR+ G + + +G S A L G
Sbjct: 138 IGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWG 196
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 392 YEGLVLAINLRVLPLAMETDSVLLIKWFQYEIA*PWRYLYILWKIIDLLQH-YDISAVHI 568
Y GL A +V + +E DS ++ + + I+ +++ + LQ + + V++
Sbjct: 198 YYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLVRLCHNFLQKDWLVRIVYV 257
Query: 569 FREASSVADGLARVASL 619
+REA+ +ADGLA L
Sbjct: 258 YREANCLADGLANYTIL 274
>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +1
Query: 61 SLLAFVLWGLWRVRYSYLFDAQTPRISSAMRIILPLLLSVA---SQTLSPAVKSPLCVR- 228
++ A ++W W+ R +F T + ++ + + V S + + P R
Sbjct: 500 TIFAVIIWWGWKWRCGNIFGENT-KCRDRVKFVKEWAVEVYRAHSGNVLVGITQPRVERM 558
Query: 229 --WLFPPSTCIKANVDGSANGNPGLSGAGIVLRNEYGCFLAAKYIALGYGSNVKAFLRG 399
W+ P +K N DG++ GNPGL+ AG VLR+ G + + +G S +A L G
Sbjct: 559 IGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWG 617
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 392 YEGLVLAINLRVLPLAMETDSVLLIKWFQYEIA*PWRYLYILWKIIDLLQH-YDISAVHI 568
Y GL A +V + +E DS +++ + + I+ +++ LQ + + VH+
Sbjct: 619 YYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHV 678
Query: 569 FREASSVADGLARVA 613
+REA+ +ADGLA A
Sbjct: 679 YREANRLADGLANYA 693