BLASTX nr result

ID: Cephaelis21_contig00026820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026820
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...   464   e-128
ref|XP_002516245.1| chlorophyll A/B binding protein, putative [R...   459   e-127
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   454   e-125
gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]      454   e-125
emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]   444   e-122

>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  464 bits (1195), Expect = e-128
 Identities = 221/261 (84%), Positives = 237/261 (90%)
 Frame = +2

Query: 89  MAVAIASTALSSIPTIRDVTTTTSPGNATKCLLGKGRLNATKGKGVSSVCEPLPPDRPLW 268
           MA++IASTA SS+PT R+V++   P   T  L G+ RLNATKG  VSSVCEPLPPDRPLW
Sbjct: 1   MALSIASTAFSSLPT-REVSSKHFPRKLTTWLPGRVRLNATKG--VSSVCEPLPPDRPLW 57

Query: 269 FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVSGILIPEWLE 448
           FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL+WFAQAELMH RWAMLAV+GILIPE LE
Sbjct: 58  FPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILIPECLE 117

Query: 449 RLGFIENFSWYDAGAREYFADPITLFVVQLVLMGWAEGRRWADFIKPGCVDIEPTFPHKK 628
           RLGFIENFSWYDAGA+E+FADP TLFVVQL LMGW EGRRWAD I PGCVDI+ TFP+K 
Sbjct: 118 RLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPNKA 177

Query: 629 KPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGPV 808
           KPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQA+YTGEGP+
Sbjct: 178 KPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPI 237

Query: 809 ENLMAHIADPGHRNIFSAFTS 871
           ENLMAHIADPGH N+FSAFTS
Sbjct: 238 ENLMAHIADPGHCNVFSAFTS 258


>ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223544731|gb|EEF46247.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 297

 Score =  459 bits (1180), Expect = e-127
 Identities = 218/264 (82%), Positives = 235/264 (89%), Gaps = 3/264 (1%)
 Frame = +2

Query: 89  MAVAIASTALSSI-PTIRDVTTTTSPGNATKCLLGKGR--LNATKGKGVSSVCEPLPPDR 259
           MA+ IAS++LSS+  + R++           C +GK +  LNATKG GVS+VCEPLPPDR
Sbjct: 34  MALTIASSSLSSLLSSTREIPQKAFIRKIGTCQVGKAKVKLNATKG-GVSTVCEPLPPDR 92

Query: 260 PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVSGILIPE 439
           PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMH RWAMLAV+GILIPE
Sbjct: 93  PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVAGILIPE 152

Query: 440 WLERLGFIENFSWYDAGAREYFADPITLFVVQLVLMGWAEGRRWADFIKPGCVDIEPTFP 619
           WLE LGFIEN++W+DAGAREYFADP TLF+VQLVLMGW EGRRWAD IKPGCVDIEPT P
Sbjct: 153 WLESLGFIENYNWFDAGAREYFADPTTLFIVQLVLMGWVEGRRWADMIKPGCVDIEPTLP 212

Query: 620 HKKKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGE 799
           +K KPKPDVGYPGGLWFDP MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGE
Sbjct: 213 NKTKPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGE 272

Query: 800 GPVENLMAHIADPGHRNIFSAFTS 871
           GP+ENLMAHIADPGH NIFSAFTS
Sbjct: 273 GPIENLMAHIADPGHCNIFSAFTS 296


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  454 bits (1168), Expect = e-125
 Identities = 213/263 (80%), Positives = 231/263 (87%), Gaps = 1/263 (0%)
 Frame = +2

Query: 89  MAVAIASTALSSIPT-IRDVTTTTSPGNATKCLLGKGRLNATKGKGVSSVCEPLPPDRPL 265
           MA+  AS++LSS+PT  RD    +  G   KC   K R+NATKG  VSSVCEPLPPDRPL
Sbjct: 1   MALNFASSSLSSLPTRTRDKPQKSLLGKIEKCQAVKVRVNATKG--VSSVCEPLPPDRPL 58

Query: 266 WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVSGILIPEWL 445
           WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAEL+HGRWAMLA +GILIPEWL
Sbjct: 59  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWL 118

Query: 446 ERLGFIENFSWYDAGAREYFADPITLFVVQLVLMGWAEGRRWADFIKPGCVDIEPTFPHK 625
           ERLGFI+NF+W+DAG REYFADP TLFVVQL+LMGW EGRRWAD IKPGCVDI+P  PHK
Sbjct: 119 ERLGFIDNFNWFDAGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHK 178

Query: 626 KKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGP 805
            KPKPDVGYPGGLWFDP+ WGRGSPEPVM +RTKEIKNGRLAMLAFVGF FQA+YTGEGP
Sbjct: 179 TKPKPDVGYPGGLWFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGP 238

Query: 806 VENLMAHIADPGHRNIFSAFTSH 874
           ++NLMAHIADPGH NIFSAFTSH
Sbjct: 239 IDNLMAHIADPGHCNIFSAFTSH 261


>gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 261

 Score =  454 bits (1167), Expect = e-125
 Identities = 212/263 (80%), Positives = 231/263 (87%), Gaps = 1/263 (0%)
 Frame = +2

Query: 89  MAVAIASTALSSIPT-IRDVTTTTSPGNATKCLLGKGRLNATKGKGVSSVCEPLPPDRPL 265
           MA+  AS++LSS+PT  RD    +  G   KC   K R+NATKG  VSSVCEPLPPDRPL
Sbjct: 1   MALNFASSSLSSLPTRTRDKPQKSLLGKIEKCQAVKVRVNATKG--VSSVCEPLPPDRPL 58

Query: 266 WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVSGILIPEWL 445
           WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAEL+HGRWAMLA +GILIPEWL
Sbjct: 59  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWL 118

Query: 446 ERLGFIENFSWYDAGAREYFADPITLFVVQLVLMGWAEGRRWADFIKPGCVDIEPTFPHK 625
           ERLGFI+NF+W+DAG REYFADP TLFVVQL+LMGW EGRRWAD IKPGCVDI+P  PHK
Sbjct: 119 ERLGFIDNFNWFDAGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHK 178

Query: 626 KKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGP 805
            KPKPD+GYPGGLWFDP+ WGRGSPEPVM +RTKEIKNGRLAMLAFVGF FQA+YTGEGP
Sbjct: 179 TKPKPDIGYPGGLWFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGP 238

Query: 806 VENLMAHIADPGHRNIFSAFTSH 874
           ++NLMAHIADPGH NIFSAFTSH
Sbjct: 239 IDNLMAHIADPGHCNIFSAFTSH 261


>emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
          Length = 229

 Score =  444 bits (1141), Expect = e-122
 Identities = 205/230 (89%), Positives = 217/230 (94%)
 Frame = +2

Query: 182 LLGKGRLNATKGKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL 361
           ++G+ RLNATKG  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL
Sbjct: 1   MVGRVRLNATKG--VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL 58

Query: 362 LKWFAQAELMHGRWAMLAVSGILIPEWLERLGFIENFSWYDAGAREYFADPITLFVVQLV 541
           L+WFAQAELMH RWAMLAV+GILIPE LERLGFIENFSWYDAGA+E+FADP TLFVVQL 
Sbjct: 59  LRWFAQAELMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLA 118

Query: 542 LMGWAEGRRWADFIKPGCVDIEPTFPHKKKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLR 721
           LMGW EGRRWAD I PGCVDI+ TFP+K KPKPDVGYPGGLWFDPFMWGRGSPEPVMVLR
Sbjct: 119 LMGWVEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLR 178

Query: 722 TKEIKNGRLAMLAFVGFCFQAVYTGEGPVENLMAHIADPGHRNIFSAFTS 871
           TKEIKNGRLAMLAFVGFCFQA+YTGEGP+ENLMAHIADPGH N+FSAFTS
Sbjct: 179 TKEIKNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 228


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