BLASTX nr result

ID: Cephaelis21_contig00026813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026813
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   116   2e-24
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   4e-24
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   113   2e-23
dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativ...   110   9e-23

>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = -3

Query: 202 NSPTGSGKTLAYVLPIVQKLSTRRIKCLRALVVLPTRDLAVQVKEVFASLAPAVGLSVGL 23
           N+PTGSGKTLAY LPI+Q LSTR IKCLRAL+VLPTRDLA+QVK+VFA+LAPAVGLSVGL
Sbjct: 77  NAPTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLALQVKQVFAALAPAVGLSVGL 136

Query: 22  AVGQSSI 2
           AVGQSSI
Sbjct: 137 AVGQSSI 143


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = -3

Query: 202 NSPTGSGKTLAYVLPIVQKLSTRRIKCLRALVVLPTRDLAVQVKEVFASLAPAVGLSVGL 23
           NSPTGSGKTLAY LPIVQ LS+R +KCLRALVVLPTRDLA+QVKEVF+++APAVGLSVGL
Sbjct: 76  NSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGL 135

Query: 22  AVGQSSI 2
           AVGQSSI
Sbjct: 136 AVGQSSI 142


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = -3

Query: 202 NSPTGSGKTLAYVLPIVQKLSTRRIKCLRALVVLPTRDLAVQVKEVFASLAPAVGLSVGL 23
           NSPTGSGKTLAY LPIVQ LSTR +KCLRALVVLPTRDLA+QVK+VFA++APA+GLSVGL
Sbjct: 79  NSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAAIAPAMGLSVGL 138

Query: 22  AVGQSSI 2
           AVGQSSI
Sbjct: 139 AVGQSSI 145


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/67 (85%), Positives = 63/67 (94%)
 Frame = -3

Query: 202 NSPTGSGKTLAYVLPIVQKLSTRRIKCLRALVVLPTRDLAVQVKEVFASLAPAVGLSVGL 23
           NSPTGSGKTLAY LPIV  LS+R +KCLRALVVLPTRDLA+QVKEVFA++APAVGLSVGL
Sbjct: 76  NSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVGL 135

Query: 22  AVGQSSI 2
           AVGQ+SI
Sbjct: 136 AVGQTSI 142


>dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
           gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA
           helicase [Oryza sativa Japonica Group]
          Length = 517

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = -3

Query: 202 NSPTGSGKTLAYVLPIVQKLSTRRIKCLRALVVLPTRDLAVQVKEVFASLAPAVGLSVGL 23
           NSPTGSGKTLAY LPIVQ L+TR+++CLRALVVLPTRDLA+QVKEVF ++AP VGLSVG 
Sbjct: 80  NSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVGLSVGS 139

Query: 22  AVGQSSI 2
           AVGQSSI
Sbjct: 140 AVGQSSI 146


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