BLASTX nr result
ID: Cephaelis21_contig00026672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00026672
(712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t... 375 e-102
ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, part... 375 e-102
emb|CBI37367.3| unnamed protein product [Vitis vinifera] 375 e-102
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-... 374 e-101
gb|AAT70180.1| MSH4 [Arabidopsis thaliana] 373 e-101
>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
mismatch repair protein MSH4; Short=AtMSH4; AltName:
Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
Length = 792
Score = 375 bits (962), Expect = e-102
Identities = 180/237 (75%), Positives = 198/237 (83%)
Frame = +1
Query: 1 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGV 180
LLQPLKDIETIN RLDCLDELMSNEQLFFGLSQ LRKFPKETDRVLCHFCFKPKKVT V
Sbjct: 215 LLQPLKDIETINTRLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAV 274
Query: 181 LAVDTARKXXXXXXXXXXXXXXXXXXXXXSKILKDAKCFLLGNIYKSVCENEKYDSIRKR 360
+ + RK +K+LKDAKCFLL N+YKSVCEN++Y SIRK+
Sbjct: 275 IGFENTRKSQNMISSIILLKTALDALPILAKVLKDAKCFLLANVYKSVCENDRYASIRKK 334
Query: 361 IGEVIDDDVLHTRAPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFK 540
IGEVIDDDVLH R PFVARTQQCFA+KAGIDGFLDIARR+FCDTSEAIHNLA+KYRE+F
Sbjct: 335 IGEVIDDDVLHARVPFVARTQQCFALKAGIDGFLDIARRTFCDTSEAIHNLASKYREEFN 394
Query: 541 LPNLKIPFNNRQGFYFSIPTKDIQGKLPSKFIQVVKHGNNTHCSTLELASLNVRNKS 711
LPNLK+PFNNRQGF+F IP K++QGKLP+KF QVVKHG N HCS+LELASLNVRNKS
Sbjct: 395 LPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIHCSSLELASLNVRNKS 451
>ref|XP_002262998.2| PREDICTED: mutS protein homolog 4-like, partial [Vitis vinifera]
Length = 456
Score = 375 bits (962), Expect = e-102
Identities = 186/230 (80%), Positives = 194/230 (84%)
Frame = +1
Query: 1 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGV 180
LLQPLKDIETINARLDCLDELMSNEQLFFGLSQ LRKFPKETDRVLCHFCFKPKKVT V
Sbjct: 227 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEV 286
Query: 181 LAVDTARKXXXXXXXXXXXXXXXXXXXXXSKILKDAKCFLLGNIYKSVCENEKYDSIRKR 360
L V+ ARK SK+LKDAK FLL N+YKSVC NE Y SIRKR
Sbjct: 287 LGVEYARKNQMLISSIILLKTALDALPLLSKVLKDAKSFLLANVYKSVCANETYASIRKR 346
Query: 361 IGEVIDDDVLHTRAPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFK 540
IGEVID+DVLH R PFVARTQQCFAVKAGIDG LDIARRSFCDTSEAIHNLANKYREDFK
Sbjct: 347 IGEVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDIARRSFCDTSEAIHNLANKYREDFK 406
Query: 541 LPNLKIPFNNRQGFYFSIPTKDIQGKLPSKFIQVVKHGNNTHCSTLELAS 690
LPNLK+PFNNRQGFYF+IP KDIQGKLPSKFIQV++HGNN HCSTLELAS
Sbjct: 407 LPNLKLPFNNRQGFYFTIPQKDIQGKLPSKFIQVLRHGNNIHCSTLELAS 456
>emb|CBI37367.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 375 bits (962), Expect = e-102
Identities = 186/230 (80%), Positives = 194/230 (84%)
Frame = +1
Query: 1 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGV 180
LLQPLKDIETINARLDCLDELMSNEQLFFGLSQ LRKFPKETDRVLCHFCFKPKKVT V
Sbjct: 51 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEV 110
Query: 181 LAVDTARKXXXXXXXXXXXXXXXXXXXXXSKILKDAKCFLLGNIYKSVCENEKYDSIRKR 360
L V+ ARK SK+LKDAK FLL N+YKSVC NE Y SIRKR
Sbjct: 111 LGVEYARKNQMLISSIILLKTALDALPLLSKVLKDAKSFLLANVYKSVCANETYASIRKR 170
Query: 361 IGEVIDDDVLHTRAPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFK 540
IGEVID+DVLH R PFVARTQQCFAVKAGIDG LDIARRSFCDTSEAIHNLANKYREDFK
Sbjct: 171 IGEVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDIARRSFCDTSEAIHNLANKYREDFK 230
Query: 541 LPNLKIPFNNRQGFYFSIPTKDIQGKLPSKFIQVVKHGNNTHCSTLELAS 690
LPNLK+PFNNRQGFYF+IP KDIQGKLPSKFIQV++HGNN HCSTLELAS
Sbjct: 231 LPNLKLPFNNRQGFYFTIPQKDIQGKLPSKFIQVLRHGNNIHCSTLELAS 280
>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
sativus]
Length = 770
Score = 374 bits (960), Expect = e-101
Identities = 185/237 (78%), Positives = 199/237 (83%)
Frame = +1
Query: 1 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGV 180
LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFK KKVTN V
Sbjct: 193 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEV 252
Query: 181 LAVDTARKXXXXXXXXXXXXXXXXXXXXXSKILKDAKCFLLGNIYKSVCENEKYDSIRKR 360
L A+K SK+LK+AK FLL NIYKS+CENEKY +IRKR
Sbjct: 253 LHPSDAKKSQNLISSIILLKTALEALPLLSKVLKEAKSFLLANIYKSICENEKYTNIRKR 312
Query: 361 IGEVIDDDVLHTRAPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFK 540
IGEVID+DVLH R PF+ARTQQCFAVKAGIDG LDIARR+FCDTSEAIHNLANKYRE++K
Sbjct: 313 IGEVIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYK 372
Query: 541 LPNLKIPFNNRQGFYFSIPTKDIQGKLPSKFIQVVKHGNNTHCSTLELASLNVRNKS 711
L NLK+PFNNRQGFY SIP KD+QGKLP+KFIQV+KHGNN CSTLELASLNVRNKS
Sbjct: 373 LSNLKLPFNNRQGFYLSIPHKDVQGKLPNKFIQVLKHGNNIRCSTLELASLNVRNKS 429
>gb|AAT70180.1| MSH4 [Arabidopsis thaliana]
Length = 792
Score = 373 bits (958), Expect = e-101
Identities = 179/237 (75%), Positives = 198/237 (83%)
Frame = +1
Query: 1 LLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGV 180
LLQPLKDIETIN RLDCLDELMSNEQLFFGLSQ LRKFP+ETDRVLCHFCFKPKKVT V
Sbjct: 215 LLQPLKDIETINTRLDCLDELMSNEQLFFGLSQVLRKFPEETDRVLCHFCFKPKKVTEAV 274
Query: 181 LAVDTARKXXXXXXXXXXXXXXXXXXXXXSKILKDAKCFLLGNIYKSVCENEKYDSIRKR 360
+ + RK +K+LKDAKCFLL N+YKSVCEN++Y SIRK+
Sbjct: 275 IGFENTRKSQNMISSIILLKTALDALPILAKVLKDAKCFLLANVYKSVCENDRYASIRKK 334
Query: 361 IGEVIDDDVLHTRAPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYREDFK 540
IGEVIDDDVLH R PFVARTQQCFA+KAGIDGFLDIARR+FCDTSEAIHNLA+KYRE+F
Sbjct: 335 IGEVIDDDVLHARVPFVARTQQCFALKAGIDGFLDIARRTFCDTSEAIHNLASKYREEFN 394
Query: 541 LPNLKIPFNNRQGFYFSIPTKDIQGKLPSKFIQVVKHGNNTHCSTLELASLNVRNKS 711
LPNLK+PFNNRQGF+F IP K++QGKLP+KF QVVKHG N HCS+LELASLNVRNKS
Sbjct: 395 LPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVKHGKNIHCSSLELASLNVRNKS 451