BLASTX nr result

ID: Cephaelis21_contig00026658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026658
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    59   4e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               56   4e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = -3

Query: 554  LSQSLITFWMISG*ITRGQSS-KEMMALLQGLLCCQERSFHGFVIESDSLVLVRYLADNS 378
            L Q ++ F +  G    G SS  E M++L G+  C +R  +  + E+DS++L + + +N 
Sbjct: 1023 LGQVIMAFTIKLG---EGTSSWAEAMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENW 1079

Query: 377  SSWPWRIKSELQQINELIQQMDCQLVHGLREINTVADSLAKLASQSCQSASFTA-DMLPR 201
            S  PWR+   +++I +++++    + H LRE N  AD LA ++  +  +  F +   LP 
Sbjct: 1080 SI-PWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLASISLSTDVNHVFKSYANLPS 1138

Query: 200  KIQGQVRMDQISYPYLR 150
             ++G V +D+++ P  R
Sbjct: 1139 LVKGLVNLDRMNLPTFR 1155


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
 Frame = -3

Query: 488  EMMALLQGLLCCQERSFHGFVIESDSLVLVRYLADNSSSWPWRIKSELQQINELIQQMDC 309
            E +A   G+L C ++ FH   +E DS ++V  +  N  +   +IK  ++ I +++ +M+C
Sbjct: 798  EALAARFGILWCLQQGFHNCYLELDSKLVVD-MVRNGQATNLKIKGVVEDIIQVVAKMNC 856

Query: 308  QLVHGLREINTVADSLAKLASQSCQSASF-TADMLPRKIQGQVRMDQISYPYLR 150
            ++ H  RE N VAD+LAK A  S ++  +     +P+   G  ++D++  P +R
Sbjct: 857  EVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIR 910