BLASTX nr result

ID: Cephaelis21_contig00026572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026572
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627350.1| Nuclear pore complex protein Nup107 [Medicag...    56   3e-06
ref|XP_002529197.1| conserved hypothetical protein [Ricinus comm...    56   4e-06
ref|XP_002331185.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_003627350.1| Nuclear pore complex protein Nup107 [Medicago truncatula]
           gi|355521372|gb|AET01826.1| Nuclear pore complex protein
           Nup107 [Medicago truncatula]
          Length = 599

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 33/39 (84%)
 Frame = -3

Query: 117 HIDLLALQVRGSHVGTYLPKSGIWHNTQ*FLMKGSSTLN 1
           ++ +LA++VRGSHVG+YLP SG+WH+TQ +L KG+S  N
Sbjct: 290 YLHVLAMRVRGSHVGSYLPSSGVWHHTQRYLNKGTSDRN 328


>ref|XP_002529197.1| conserved hypothetical protein [Ricinus communis]
           gi|223531375|gb|EEF33211.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1088

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -3

Query: 105 LALQVRGSHVGTYLPKSGIWHNTQ*FLMKGSSTLN 1
           L  +VRGSHVGTYLP SGIWH+TQ FL KG+S+ N
Sbjct: 265 LESKVRGSHVGTYLPNSGIWHHTQRFLRKGASSTN 299


>ref|XP_002331185.1| predicted protein [Populus trichocarpa] gi|222873306|gb|EEF10437.1|
           predicted protein [Populus trichocarpa]
          Length = 1096

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = -3

Query: 105 LALQVRGSHVGTYLPKSGIWHNTQ*FLMKGSSTLN 1
           L  +V+GSHVGTYLPKSGIWH TQ FL KG+S  N
Sbjct: 273 LESKVQGSHVGTYLPKSGIWHQTQRFLQKGASNTN 307


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