BLASTX nr result

ID: Cephaelis21_contig00026549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026549
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    71   1e-10
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          71   2e-10
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    71   2e-10
ref|XP_003543094.1| PREDICTED: putative ribonuclease H protein A...    70   3e-10
ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A...    68   1e-09

>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +3

Query: 6   IAWTKPPPTYFKLNTDGSSLGNPGISGCGFVIRNSQERMVHAAAISIGTASNMLAEIEAL 185
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +       A++IG  S  LAE+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 186 RLGLNWFITNHPNDKLQIEADSKILIQFINKQVRWPWRYSGKLQEISD-ITEQNSFPISH 362
             GL +        +L+IE DS+I++ F+   +      S  ++   D I+      ISH
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFISRDWRVRISH 262

Query: 363 ICREAN 380
           + REAN
Sbjct: 263 VYREAN 268


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +3

Query: 6   IAWTKPPPTYFKLNTDGSSLGNPGISGCGFVIRNSQERMVHAAAISIGTASNMLAEIEAL 185
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +       A++IG  S  LAE+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 186 RLGLNWFITNHPNDKLQIEADSKILIQFINKQVRWPWRYSGKLQEISD-ITEQNSFPISH 362
             GL +        +L+IE DS+I++ F+   +      S  ++   D I+      ISH
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISH 262

Query: 363 ICREAN 380
           + REAN
Sbjct: 263 VYREAN 268


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +3

Query: 6   IAWTKPPPTYFKLNTDGSSLGNPGISGCGFVIRNSQERMVHAAAISIGTASNMLAEIEAL 185
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +       A++IG  S  LAE+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 186 RLGLNWFITNHPNDKLQIEADSKILIQFINKQVRWPWRYSGKLQEISD-ITEQNSFPISH 362
             GL +        +L+IE DS+I++ F+   +      S  ++   D I+      ISH
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISH 262

Query: 363 ICREAN 380
           + REAN
Sbjct: 263 VYREAN 268


>ref|XP_003543094.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 201

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
 Frame = +3

Query: 3   PIAWTKPPPTYFKLNTDGSSLGNPGISGCGFVIRNSQERMVHAAAISIGTASNMLAEIEA 182
           P+AW KP   + KLN DGS     G +  G V+RN     +   A SIG A++ +AE+ A
Sbjct: 31  PVAWKKPRIGWTKLNFDGSCKCLSGKASIGGVVRNHNAEFLLGYAESIGQANSTIAELTA 90

Query: 183 LRLGLNWFITNHPNDKLQIEADSKILIQFINKQVRWPWRYSGKLQEISDIT----EQNSF 350
           LR GL   + N  ND + +E D+K L++ I K  R   R +   + I+ I     E N+F
Sbjct: 91  LRKGLELVLENGWND-IWLEGDAKTLVEIIVK--RRKVRCTEVQRHINHINTILPEFNNF 147

Query: 351 PISHICREAN 380
            +SHI RE N
Sbjct: 148 FVSHIYREGN 157


>ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus] gi|449488498|ref|XP_004158057.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 205

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
 Frame = +3

Query: 3   PIAWTKPPPTYFKLNTDGSSLGN--PGISGCGFVIRNSQERMVHAAAISIGTASNMLAEI 176
           P+AWT+P   + KLN DGSS G   PG++  G V+R+ + + +   A SIG A + +AE+
Sbjct: 33  PVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAESIGRAYSSMAEL 92

Query: 177 EALRLGLNWFITNHPNDKLQIEADSKILIQFI--NKQVRWPWRYSGKLQEISDITEQNSF 350
           +AL  GL   + N   D + +E D+K L++ +  N++V+     S      S + + ++ 
Sbjct: 93  KALTKGLELVLENGWKD-VWVEGDAKGLVEILAENREVKCMEARSYLRHIKSLLLDFDNC 151

Query: 351 PISHICREANGV 386
            +SHI RE N V
Sbjct: 152 KVSHIYREGNKV 163


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