BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026548
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               62   5e-08
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis ...    59   4e-07
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|YP_007315870.1| ribonuclease HI [Halobacteroides halobius DS...    58   9e-07

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
 Frame = -1

Query: 439  KKLQLYPK---------DFTCYKLNTDGS-SLGNPGILGCGFVIQNSQGRMVHASVISIG 290
            + L+ YPK         +  C K+NTDGS S GN G+   G+++++   RM+ A  I   
Sbjct: 734  ESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGNAGL---GWIVRDHTRRMIMAFSIPSS 790

Query: 289  IASNMLSEIETLRLGLIW-FTKNYPNDKLQIEADSKILIQLINKQALWPWRFSGKVQQIS 113
             +SN L+E    R G++W   + + N    +E DSK+++ ++        +  G V+ I 
Sbjct: 791  CSSNNLAEALAARFGILWCLQQGFHN--CYLELDSKLVVDMVRNGQATNLKIKGVVEDII 848

Query: 112  NIIEQKSFPISHIYRE 65
             ++ + +  ++H YRE
Sbjct: 849  QVVAKMNCEVNHCYRE 864


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = -1

Query: 400 KLNTDGSSLGNPGILGCGFVIQNSQGRMVHASVISIGIASNMLSEIETLRLGL-IWFTKN 224
           KLN DG S GNPG+ G G VI++  G  +     +IGI S++ +E+  + +GL + + + 
Sbjct: 85  KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 223 YPNDKLQIEADSKILIQLINKQALWPWRFSGKVQQISNIIEQK-SFPISHIYRE 65
           +   K+ +E+DSK+++ LIN  ++   R    + QI  ++ +       H+YRE
Sbjct: 145 F--RKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYRE 196


>ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|332192355|gb|AEE30476.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 353

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
 Frame = -1

Query: 463 ASSSTSPAKKLQ-----LYPKDFTCYKLNTDGSSLGNPGILGCGFVIQNSQGRMVHASVI 299
           AS S  P +KL       Y  D TC+ +  DG+S GNPG+ G   V++   G ++     
Sbjct: 193 ASISYDPLEKLSKVEPSAYISDETCF-IEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQ 251

Query: 298 SIGIASNMLSEIETLRLGLIW-FTKNYPNDKLQIEADSKILIQLINKQALWPWRFSGKVQ 122
            +GIA+N  +E   L LGL +   K Y N  ++++ DSK++   I  Q         K+ 
Sbjct: 252 GLGIATNNAAEYHALILGLKYAIEKGYKN--IKVKGDSKLVCMQIKGQWKVNHEVLAKLH 309

Query: 121 QISNIIEQK--SFPISHIYR 68
           + + ++  K  SF ISH+ R
Sbjct: 310 KEAKLLCNKCVSFEISHVLR 329


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = -1

Query: 400 KLNTDGSSLGNPGILGCGFVIQNSQGRMVHASVISIGIASNMLSEIETLRLGL-IWFTKN 224
           KLN DG S GNPG+ G G VI++  G  +     +IGI S++ +E+  + +GL + + + 
Sbjct: 85  KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 223 YPNDKLQIEADSKILIQLINKQALWPWRFSGKVQQISNIIEQK-SFPISHIYRE 65
           +   K+ +E+DSK+++ LIN  ++   R    + QI  ++ +       H+YRE
Sbjct: 145 F--RKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTYHVYRE 196


>ref|YP_007315870.1| ribonuclease HI [Halobacteroides halobius DSM 5150]
           gi|433670962|gb|AGB41777.1| ribonuclease HI
           [Halobacteroides halobius DSM 5150]
          Length = 134

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = -1

Query: 391 TDGSSLGNPGILGCGFVIQNSQGRMVHASVISIGIASNMLSEIETLRLGLIWFTKNYPND 212
           TDG S GNPG  G G VI N+ G+ V      IG A+N ++E + + LGL     NY   
Sbjct: 8   TDGGSRGNPGPAGVGAVIYNN-GQKVEELFEYIGRATNNVAEYKAVILGLKLLADNYSQA 66

Query: 211 KLQIEADSKILI-QLINKQALWPWRFSGKVQQISNIIEQKS-FPISHIYRE 65
           K++I+ADS++L+ QL  +  +         QQI  +I   S    +HI RE
Sbjct: 67  KIEIKADSQLLVKQLTGEYKVKSDNLKPLYQQIKELITNFSKVEFTHIPRE 117