BLASTX nr result

ID: Cephaelis21_contig00026530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026530
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28199.1| unknown [Arabidopsis thaliana]                          69   4e-10
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    69   4e-10
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    69   4e-10
ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    66   3e-09

>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/89 (39%), Positives = 58/89 (65%)
 Frame = -3

Query: 338 IAWTKPPPTYFKLNTDGSSLGNPGVSGCGFVIRNSQGRMVHSSAISIGIASNMLSEIEAL 159
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +G      A++IG+ S  L+E+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 158 RFGLNWFITNYPNDKLQIEADSKILMQFI 72
            +GL +        +L+IE DS+I++ F+
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFL 231


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/89 (39%), Positives = 58/89 (65%)
 Frame = -3

Query: 338 IAWTKPPPTYFKLNTDGSSLGNPGVSGCGFVIRNSQGRMVHSSAISIGIASNMLSEIEAL 159
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +G      A++IG+ S  L+E+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 158 RFGLNWFITNYPNDKLQIEADSKILMQFI 72
            +GL +        +L+IE DS+I++ F+
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFL 231


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/89 (39%), Positives = 58/89 (65%)
 Frame = -3

Query: 338 IAWTKPPPTYFKLNTDGSSLGNPGVSGCGFVIRNSQGRMVHSSAISIGIASNMLSEIEAL 159
           IAW+KP   ++KLNTDG+S GNPG++  G V+R+ +G      A++IG+ S  L+E+  +
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203

Query: 158 RFGLNWFITNYPNDKLQIEADSKILMQFI 72
            +GL +        +L+IE DS+I++ F+
Sbjct: 204 YYGL-YIAWERRVTRLEIEVDSEIVVGFL 231


>ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|222839453|gb|EEE77790.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
 Frame = -3

Query: 536 WSLWCMRSSCIFSSDRPSTQKAIYHASGLIFNITSQKTPVVSKGLYLEYRKLPYVKAFML 357
           WSLW +R+  IF    P            IF +   +  +  K ++ ++   PY  + ++
Sbjct: 13  WSLWLLRNDLIFQQKTPDYDS--------IFFLIITRLCLWLKAIHSDF---PYSPSDLI 61

Query: 356 ARK------------AVPIAWTKPPPTYFKLNTDGSSLGNPGVSGCGFVIRNSQGRMVHS 213
                           +   W+ P     K N DGSSLG PG SG G V+RN  G ++  
Sbjct: 62  RSVDGLLRWSNAHSFRIHNMWSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGI 121

Query: 212 SAISIGIASNMLSEIEALRFGLNWFITN--YPNDKLQIEADSKILMQFINKQAQWPWR 45
            ++ +GI  + ++E+ A+   +    +N  + +  L IE+DS   + ++NK    PW+
Sbjct: 122 FSVPVGILDSNIAELRAIVKAIELSASNCLFHHQHLIIESDSVNAISWMNKPHNRPWK 179


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/89 (34%), Positives = 55/89 (61%)
 Frame = -3

Query: 338 IAWTKPPPTYFKLNTDGSSLGNPGVSGCGFVIRNSQGRMVHSSAISIGIASNMLSEIEAL 159
           ++W KP   + KLNTDG+S GNPG++  G ++R   G  +   A++IGI S  L+E+  +
Sbjct: 624 VSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLAELWRV 683

Query: 158 RFGLNWFITNYPNDKLQIEADSKILMQFI 72
            +GL +        +L++E DS++++ F+
Sbjct: 684 YYGL-YIAWERKITRLEVEVDSELVVGFL 711


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