BLASTX nr result

ID: Cephaelis21_contig00026523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026523
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]           162   3e-38
ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis tha...   162   3e-38
emb|CAA72072.1| G14587-6 [Arabidopsis thaliana]                       162   3e-38
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...   161   5e-38
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38

>emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]
          Length = 672

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/113 (72%), Positives = 94/113 (83%), Gaps = 4/113 (3%)
 Frame = -3

Query: 352 FGLHFNS----YMPKITKCLRDPCEVVRRQTFILLARLLQRDYVKWRGXXXXXXXXXLVD 185
           F +H+ +    Y+PKITK LRDPCEVVRRQTFILL+RLLQRDYVKWRG         LVD
Sbjct: 284 FCVHYTAMIECYIPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVD 343

Query: 184 ESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIFVLNDCNAHTGRSNPQNSKS 26
           ESEKIR+LAD+LFG+ILKVKAPLLAYNSFVEAI+VLNDC+AHTG SNP + +S
Sbjct: 344 ESEKIRRLADFLFGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQS 396


>ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis thaliana]
            gi|5281022|emb|CAB45995.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268337|emb|CAB78631.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658263|gb|AEE83663.1| condensin-2 complex subunit
            D3 [Arabidopsis thaliana]
          Length = 1314

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/113 (72%), Positives = 94/113 (83%), Gaps = 4/113 (3%)
 Frame = -3

Query: 352  FGLHFNS----YMPKITKCLRDPCEVVRRQTFILLARLLQRDYVKWRGXXXXXXXXXLVD 185
            F +H+ +    Y+PKITK LRDPCEVVRRQTFILL+RLLQRDYVKWRG         LVD
Sbjct: 911  FCVHYTAMIECYIPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVD 970

Query: 184  ESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIFVLNDCNAHTGRSNPQNSKS 26
            ESEKIR+LAD+LFG+ILKVKAPLLAYNSFVEAI+VLNDC+AHTG SNP + +S
Sbjct: 971  ESEKIRRLADFLFGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQS 1023


>emb|CAA72072.1| G14587-6 [Arabidopsis thaliana]
          Length = 672

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/113 (72%), Positives = 94/113 (83%), Gaps = 4/113 (3%)
 Frame = -3

Query: 352 FGLHFNS----YMPKITKCLRDPCEVVRRQTFILLARLLQRDYVKWRGXXXXXXXXXLVD 185
           F +H+ +    Y+PKITK LRDPCEVVRRQTFILL+RLLQRDYVKWRG         LVD
Sbjct: 284 FCVHYTAMIECYIPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVD 343

Query: 184 ESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIFVLNDCNAHTGRSNPQNSKS 26
           ESEKIR+LAD+LFG+ILKVKAPLLAYNSFVEAI+VLNDC+AHTG SNP + +S
Sbjct: 344 ESEKIRRLADFLFGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQS 396


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1315

 Score =  161 bits (408), Expect = 5e-38
 Identities = 82/113 (72%), Positives = 93/113 (82%), Gaps = 4/113 (3%)
 Frame = -3

Query: 352  FGLHFNS----YMPKITKCLRDPCEVVRRQTFILLARLLQRDYVKWRGXXXXXXXXXLVD 185
            F +H+ +    Y+PKIT  LRDPCEVVRRQTFILL+RLLQRDYVKWRG         LVD
Sbjct: 910  FCVHYTAMIECYIPKITNRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVD 969

Query: 184  ESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIFVLNDCNAHTGRSNPQNSKS 26
            ESEKIRQLAD+LFG+ILKVKAPLLAYNSFVEAI+VLNDC+AHTG SNP + +S
Sbjct: 970  ESEKIRQLADFLFGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQS 1022


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/110 (73%), Positives = 91/110 (82%)
 Frame = -3

Query: 331  YMPKITKCLRDPCEVVRRQTFILLARLLQRDYVKWRGXXXXXXXXXLVDESEKIRQLADY 152
            Y+ KITKCLRDPCE+VRRQTFILL+RLLQRDYVKWRG         LVDESE IRQLAD+
Sbjct: 870  YISKITKCLRDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESETIRQLADF 929

Query: 151  LFGNILKVKAPLLAYNSFVEAIFVLNDCNAHTGRSNPQNSKSENLHFCIR 2
            LFGNILKVKAPLLAYNSFVEAIFVLNDC+AH G    ++S++E+  F IR
Sbjct: 930  LFGNILKVKAPLLAYNSFVEAIFVLNDCDAHNGHCGSKSSQTESHLFSIR 979


Top