BLASTX nr result

ID: Cephaelis21_contig00026517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026517
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   238   2e-60
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   222   1e-55
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   222   1e-55
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   219   9e-55
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   217   4e-54

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  238 bits (606), Expect = 2e-60
 Identities = 125/310 (40%), Positives = 189/310 (60%)
 Frame = +2

Query: 5    GSDGYSGIFYQKYWEIIAENLHKVVQEFFVGVPIPRRISNTTIVLIPKKDSPVSLKDFRP 184
            G +G+ G FYQ YW+I+  ++ + VQ+FF+   + + I++  IVLIPK      + D+RP
Sbjct: 461  GPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRP 520

Query: 185  ISLCTFLRKVFSRIICDRIQSILPCLVSEEQTAFLKGRDICDNVLLAQELVQRLHQKVRG 364
            I+L  F  K+ S+I+ DR+  I   ++S EQ  F++ RDI   V+LA E +  L ++  G
Sbjct: 521  IALANFQFKIISKILADRLADITMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYG 580

Query: 365  HNILFKLDMTKAFDRVSWQFLRLLLMKFGFHEHFIHLILNNLSSSWFTVLLNGEQTESFK 544
             N+  K+D+ KAFD + W FL  +L +FGF E F+H IL  L S+  +VL+NG+    F 
Sbjct: 581  GNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFT 640

Query: 545  ASRGLKQGDPLSLLLFILMVEALGRGLTEQVRLGKLHTFSLPRGATPITHLMFADDLIIF 724
             S G++QGDPLS LLF L+ E L R L+     G+L   S  RG +  TH+++ADD++IF
Sbjct: 641  CSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADDVLIF 700

Query: 725  TRGFKKSIRNLFDFLSRYEDATGQKINRSKSSFVCSKFATIAQIRMFSHISEVHQGSLPI 904
              G K++IR L    S+Y + +GQ IN +KS F  S   T ++++M S +   + GSLP 
Sbjct: 701  CTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFTSAM-TGSRVQMISSLLGFNVGSLPF 759

Query: 905  KYLGNNLYAG 934
             YLG  ++ G
Sbjct: 760  TYLGCPIFRG 769


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  222 bits (565), Expect = 1e-55
 Identities = 119/306 (38%), Positives = 181/306 (59%), Gaps = 2/306 (0%)
 Frame = +2

Query: 5    GSDGYSGIFYQKYWEIIAENLHKVVQEFFVGVPIPRRISNTTIVLIPKKDSPVSLKDFRP 184
            G DG   IFYQ++W I+ +++   +     G   P  ++NT I LIPK  +P    +FRP
Sbjct: 451  GPDGMHVIFYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRP 510

Query: 185  ISLCTFLRKVFSRIICDRIQSILPCLVSEEQTAFLKGRDICDNVLLAQELVQRLHQKVRG 364
            I+LC  L K+ S+ I  R++S LP ++SE Q+AF+ GR I DN L+A E+   +  + R 
Sbjct: 511  IALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRS 570

Query: 365  HN--ILFKLDMTKAFDRVSWQFLRLLLMKFGFHEHFIHLILNNLSSSWFTVLLNGEQTES 538
                I  KLDM+KA+DRV W FLR LL+  GF   +++LI+  +SS  ++ ++NG    S
Sbjct: 571  RKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGS 630

Query: 539  FKASRGLKQGDPLSLLLFILMVEALGRGLTEQVRLGKLHTFSLPRGATPITHLMFADDLI 718
               +RGL+QGDPLS  LFI++ +A  + +  +V+  +LH     R    I+HL FADD +
Sbjct: 631  VVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSL 690

Query: 719  IFTRGFKKSIRNLFDFLSRYEDATGQKINRSKSSFVCSKFATIAQIRMFSHISEVHQGSL 898
            +FTR  ++    + D L++YE A+GQKIN  KS    S+  +++Q    ++I  + Q   
Sbjct: 691  LFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDR 750

Query: 899  PIKYLG 916
              KYLG
Sbjct: 751  HEKYLG 756


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  222 bits (565), Expect = 1e-55
 Identities = 123/306 (40%), Positives = 183/306 (59%), Gaps = 2/306 (0%)
 Frame = +2

Query: 5    GSDGYSGIFYQKYWEIIAENLHKVVQEFFVGVPIPRRISNTTIVLIPKKDSPVSLKDFRP 184
            G DG   IFYQK+W II +++ + V     G   P  I++T I LIPK  +P +  +FRP
Sbjct: 451  GPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNPTTPAEFRP 510

Query: 185  ISLCTFLRKVFSRIICDRIQSILPCLVSEEQTAFLKGRDICDNVLLAQELVQRLHQKVRG 364
            I+LC  + K+ S+ +  R++  LP LVSE Q+AF+ GR I DN L+A E+   +  + R 
Sbjct: 511  IALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRS 570

Query: 365  HN--ILFKLDMTKAFDRVSWQFLRLLLMKFGFHEHFIHLILNNLSSSWFTVLLNGEQTES 538
                I  KLDM+KA+DRV W FLR LL+  GF   +++LI++ +SS  ++ ++NG    S
Sbjct: 571  RKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGS 630

Query: 539  FKASRGLKQGDPLSLLLFILMVEALGRGLTEQVRLGKLHTFSLPRGATPITHLMFADDLI 718
               +RGL+ GDPLS  LFIL+ +A  + + ++V+  +LH     R    I+HL FAD  +
Sbjct: 631  VTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSL 690

Query: 719  IFTRGFKKSIRNLFDFLSRYEDATGQKINRSKSSFVCSKFATIAQIRMFSHISEVHQGSL 898
            +FTR  ++    + + L+ YE A+GQKIN  KS    SK  +IAQ    S+I ++ Q   
Sbjct: 691  LFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVER 750

Query: 899  PIKYLG 916
             +KYLG
Sbjct: 751  HMKYLG 756


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  219 bits (557), Expect = 9e-55
 Identities = 117/278 (42%), Positives = 166/278 (59%), Gaps = 2/278 (0%)
 Frame = +2

Query: 5   GSDGYSGIFYQKYWEIIAENLHKVVQEFFVGVPIPRRISNTTIVLIPKKDSPVSLKDFRP 184
           G+DG   IFY+K+W ++ + + K V     G PIP   ++T IVLIPK ++P  LKD RP
Sbjct: 28  GADGIPSIFYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVLIPKTNTPQMLKDLRP 87

Query: 185 ISLCTFLRKVFSRIICDRIQSILPCLVSEEQTAFLKGRDICDNVLLAQELVQRLHQKVRG 364
           ISLC  L K+ S+++ +R++ ILP ++S  Q+AF+ GR I DNVLLA E+V  L    +G
Sbjct: 88  ISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKG 147

Query: 365 HNIL--FKLDMTKAFDRVSWQFLRLLLMKFGFHEHFIHLILNNLSSSWFTVLLNGEQTES 538
              L   KLDM+KA+DRV W FL  ++ K GF E ++ LI+  +++  + + +N   T+ 
Sbjct: 148 AGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVTTVTYKIKVNDSYTQK 207

Query: 539 FKASRGLKQGDPLSLLLFILMVEALGRGLTEQVRLGKLHTFSLPRGATPITHLMFADDLI 718
               RGL+QGDPLS  LFI+  E L   L +  + GK+    + RGA  + HL FADD +
Sbjct: 208 IFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSL 267

Query: 719 IFTRGFKKSIRNLFDFLSRYEDATGQKINRSKSSFVCS 832
           I  R        L   L  YE A+GQ IN+ KSS + S
Sbjct: 268 ILMRARASDALELRRILDVYEKASGQVINKEKSSMMFS 305


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  217 bits (552), Expect = 4e-54
 Identities = 117/312 (37%), Positives = 180/312 (57%), Gaps = 2/312 (0%)
 Frame = +2

Query: 5    GSDGYSGIFYQKYWEIIAENLHKVVQEFFVGVPIPRRISNTTIVLIPKKDSPVSLKDFRP 184
            G DG    FY+  W+++ E +   V E   G  IP   ++ TIVLIPK   P  +KD RP
Sbjct: 703  GPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRP 762

Query: 185  ISLCTFLRKVFSRIICDRIQSILPCLVSEEQTAFLKGRDICDNVLLAQELVQRLHQKVRG 364
            ISLC    K+ S+++ +R++ ILP ++S  Q+AF+ GR I DN+L+A E+   +  K  G
Sbjct: 763  ISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSG 822

Query: 365  H--NILFKLDMTKAFDRVSWQFLRLLLMKFGFHEHFIHLILNNLSSSWFTVLLNGEQTES 538
                  FKLDM+KA+DRV W FL  +++K GFH  +++LI+  +S+  + + +NGE +ES
Sbjct: 823  QVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSES 882

Query: 539  FKASRGLKQGDPLSLLLFILMVEALGRGLTEQVRLGKLHTFSLPRGATPITHLMFADDLI 718
            F   RGL+QGDPLS  LF+L  E     L++    G+LH   + +GA  ++HL+FADD +
Sbjct: 883  FSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSL 942

Query: 719  IFTRGFKKSIRNLFDFLSRYEDATGQKINRSKSSFVCSKFATIAQIRMFSHISEVHQGSL 898
            I  R      + L   L  YE+ +GQ IN+ KS+ + S   +  + R       + + + 
Sbjct: 943  ILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETT 1002

Query: 899  PIKYLGNNLYAG 934
              +YLG  ++ G
Sbjct: 1003 NERYLGLPVFVG 1014


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