BLASTX nr result

ID: Cephaelis21_contig00026507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026507
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus comm...    63   3e-08
emb|CBI29220.3| unnamed protein product [Vitis vinifera]               62   6e-08

>ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis]
           gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1,
           putative [Ricinus communis]
          Length = 443

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +2

Query: 5   RMLKATAHFFLP-RFASPSFFPRALCFRKMSTMPGPVIPRFVPVGTSEITSTSSSDGYRF 181
           RMLK      LP R   PSF  R +C RKM+T P P+ P+F+PV    + ST+  DG R 
Sbjct: 50  RMLKLLVS--LPTRLPFPSF-TRTICMRKMTTAPSPISPKFIPVQAPHVFSTTKPDGIRV 106

Query: 182 SLVSYNILAQ 211
            LVSYNILAQ
Sbjct: 107 RLVSYNILAQ 116


>emb|CBI29220.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/69 (53%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +2

Query: 8   MLKATAHFFLPRFASPSF-FPRALCFRKMSTMPGPVIPRFVPVGTSEITSTSSSDGYRFS 184
           ML     F LPRF SPSF     +   KMST   P+IP+F+ V   +I S S  DG+RFS
Sbjct: 1   MLLKGGVFVLPRF-SPSFSISSRIRLSKMSTAAAPIIPKFISVEGVDINSRSIPDGFRFS 59

Query: 185 LVSYNILAQ 211
           LVSYNILAQ
Sbjct: 60  LVSYNILAQ 68


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