BLASTX nr result

ID: Cephaelis21_contig00026490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026490
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like prote...   153   2e-35
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...   152   4e-35
gb|AFK41754.1| unknown [Lotus japonicus]                              152   4e-35
gb|AFK37213.1| unknown [Medicago truncatula]                          152   4e-35
ref|XP_002299989.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35

>ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
           [Vitis vinifera] gi|297741927|emb|CBI33362.3| unnamed
           protein product [Vitis vinifera]
          Length = 87

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 182
           LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 72

Query: 183 NNIAILVPGGSPDPE 227
           NNIAILVPGGSPDPE
Sbjct: 73  NNIAILVPGGSPDPE 87


>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 182
           LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLDQILLNG
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNG 72

Query: 183 NNIAILVPGGSPDPE 227
           NNIAILVPGGSPDPE
Sbjct: 73  NNIAILVPGGSPDPE 87


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 182
           LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLDQILLNG
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNG 72

Query: 183 NNIAILVPGGSPDPE 227
           NNIAILVPGGSPDPE
Sbjct: 73  NNIAILVPGGSPDPE 87


>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 182
           LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLDQILLNG
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNG 72

Query: 183 NNIAILVPGGSPDPE 227
           NNIAILVPGGSPDPE
Sbjct: 73  NNIAILVPGGSPDPE 87


>ref|XP_002299989.1| predicted protein [Populus trichocarpa]
           gi|224103927|ref|XP_002313247.1| predicted protein
           [Populus trichocarpa] gi|118484238|gb|ABK93999.1|
           unknown [Populus trichocarpa]
           gi|222847247|gb|EEE84794.1| predicted protein [Populus
           trichocarpa] gi|222849655|gb|EEE87202.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLDQILLNG 182
           LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLDQILLNG
Sbjct: 14  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNG 73

Query: 183 NNIAILVPGGSPDPE 227
           NNIAILVPGGSPDPE
Sbjct: 74  NNIAILVPGGSPDPE 88


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