BLASTX nr result

ID: Cephaelis21_contig00026472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026472
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera] gi...   101   3e-19
ref|XP_002524914.1| rer1 protein, putative [Ricinus communis] gi...   101   3e-19
ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]        99   1e-18
ref|XP_002307281.1| predicted protein [Populus trichocarpa] gi|1...    97   7e-18
gb|AFK42932.1| unknown [Medicago truncatula]                           92   2e-16

>ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera]
            gi|296082366|emb|CBI21371.3| unnamed protein product
            [Vitis vinifera]
          Length = 204

 Score =  101 bits (252), Expect = 3e-19
 Identities = 57/126 (45%), Positives = 69/126 (54%), Gaps = 34/126 (26%)
 Frame = +1

Query: 769  MDATTSGGVAAGTDTQSS---AVSRWLFDLSRGYQRLLDKWNPHVRNRWIASYVLAIV-- 933
            M+   +GGV     + SS   +VSRW  D+SR YQ LLDK  PH+ NRWI  + +A +  
Sbjct: 1    METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 934  --------------------------FLSPKVDPDGE---DAPTLPTRASDEFRPFVRRL 1026
                                      FLSP+VDP+ +   D PTLPTR SDEFRPFVRRL
Sbjct: 61   VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 1027 PEFKFW 1044
            PEFKFW
Sbjct: 121  PEFKFW 126


>ref|XP_002524914.1| rer1 protein, putative [Ricinus communis] gi|223535749|gb|EEF37411.1|
            rer1 protein, putative [Ricinus communis]
          Length = 206

 Score =  101 bits (251), Expect = 3e-19
 Identities = 55/122 (45%), Positives = 67/122 (54%), Gaps = 34/122 (27%)
 Frame = +1

Query: 781  TSGGVAAGTD------TQSSAVSRWLFDLSRGYQRLLDKWNPHVRNRWIASYVLAIV--- 933
            + GG   G D      T ++ +SRW F +S+ YQ LLDK  PHV  RWIA  V+A++   
Sbjct: 8    SGGGGGGGEDLSSLSSTPATVISRWTFTVSQRYQHLLDKTVPHVLRRWIACLVVALIYAL 67

Query: 934  -------------------------FLSPKVDPDGEDAPTLPTRASDEFRPFVRRLPEFK 1038
                                     FLSP++DP+  D PTLPTR SDEFRPFVRRLPEFK
Sbjct: 68   RVYFVQGFYIITYGLGIYMLNLLIGFLSPQIDPEVLDGPTLPTRGSDEFRPFVRRLPEFK 127

Query: 1039 FW 1044
            FW
Sbjct: 128  FW 129


>ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]
          Length = 191

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 56/113 (49%), Positives = 62/113 (54%), Gaps = 29/113 (25%)
 Frame = +1

Query: 793  VAAGTDTQSSAV-SRWLFDLSRGYQRLLDKWNPHVRNRWIASYVLAIV------------ 933
            V AG D    AV SRW F +S+ YQ +LDK  PHV  RWI   V+A V            
Sbjct: 3    VGAGDDHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFY 62

Query: 934  ----------------FLSPKVDPDGEDAPTLPTRASDEFRPFVRRLPEFKFW 1044
                            FLSP+VDP+  D PTLPTR SDEFRPFVRRLPEFKFW
Sbjct: 63   IVSYALGIYILNLLIGFLSPQVDPEISDGPTLPTRGSDEFRPFVRRLPEFKFW 115


>ref|XP_002307281.1| predicted protein [Populus trichocarpa] gi|118482911|gb|ABK93369.1|
            unknown [Populus trichocarpa] gi|222856730|gb|EEE94277.1|
            predicted protein [Populus trichocarpa]
          Length = 204

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 34/126 (26%)
 Frame = +1

Query: 769  MDATTSGGVAAGTD------TQSSAVSRWLFDLSRGYQRLLDKWNPHVRNRWIASYVLAI 930
            M+     G  +G D      T ++ +SRW F +SR YQ  LDK  PH+  RWI+  V+ +
Sbjct: 1    METGQPSGTLSGDDLSSLSSTPATTISRWSFAVSRRYQHFLDKTVPHILYRWISCLVVVL 60

Query: 931  V----------------------------FLSPKVDPDGEDAPTLPTRASDEFRPFVRRL 1026
            +                            FLSP++DP+  D PTLPTR SDEFRPFVRRL
Sbjct: 61   IYAIRVYLVQGFYIVTYGLGIYLLNLLIGFLSPQIDPEIHDGPTLPTRGSDEFRPFVRRL 120

Query: 1027 PEFKFW 1044
            PEFKFW
Sbjct: 121  PEFKFW 126


>gb|AFK42932.1| unknown [Medicago truncatula]
          Length = 192

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 31/107 (28%)
 Frame = +1

Query: 817  SSAVSRWLFDLSRGYQRLLDKWNPHVRNRWIASYVLAIV--------------------- 933
            ++A++RW F+ SR YQ +LDK  PHV  RW+   V+A+V                     
Sbjct: 9    AAAITRWKFEASRRYQHILDKSTPHVSQRWLGCLVVALVYVLRVYIVQGFYVVSYGLGIY 68

Query: 934  -------FLSPKVDP---DGEDAPTLPTRASDEFRPFVRRLPEFKFW 1044
                   FLSP+VDP   D ++ P+LPT  SDEFRPFVRRLPEFKFW
Sbjct: 69   ILNLLIGFLSPQVDPEILDADNGPSLPTSGSDEFRPFVRRLPEFKFW 115


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