BLASTX nr result

ID: Cephaelis21_contig00026453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026453
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   248   3e-64
ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-63
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   243   1e-62
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   231   6e-59
ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata] g...   230   1e-58

>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Glycine max]
          Length = 865

 Score =  248 bits (634), Expect = 3e-64
 Identities = 116/168 (69%), Positives = 139/168 (82%)
 Frame = +1

Query: 1   VLNACVTSHQWKGVSWVFEQLRKSGLRPNGATYGLAMEVMLECGKYDLVHEFYGKMKRSG 180
           VLNACV S QWKGVSWVF+QLRKSGL+PNGATYGLAMEVMLE G YDLVHEF+GKMKRSG
Sbjct: 330 VLNACVPSKQWKGVSWVFKQLRKSGLKPNGATYGLAMEVMLESGNYDLVHEFFGKMKRSG 389

Query: 181 EALNALTYKVLVKAFWREGKVREAIQAVRDMEQRGIVRAACVYYELARCLSFHGRCQEAL 360
           E   ALTYKVLVK FW+EGKV EA++AVRDME+RG++  A VYYELA CL  +GR Q+A+
Sbjct: 390 EVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGVIGTASVYYELACCLCNNGRWQDAI 449

Query: 361 MEVQKLKKLHRTRPLEVTFTGMILAAMDGGDVNGCLALFEHCKKCCTP 504
           +EV  ++ L   +PLEVTFTGMI ++MDGG +N C+ +FE+ K+ C P
Sbjct: 450 LEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICIFEYMKEHCVP 497


>ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|222853797|gb|EEE91344.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  245 bits (625), Expect = 3e-63
 Identities = 112/168 (66%), Positives = 142/168 (84%)
 Frame = +1

Query: 1   VLNACVTSHQWKGVSWVFEQLRKSGLRPNGATYGLAMEVMLECGKYDLVHEFYGKMKRSG 180
           +LNACV S QWKGVSWVF+QLR+SGL+PNGATYGLAMEVML  GKY  VHE++ KMK+SG
Sbjct: 244 ILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVMLLSGKYKSVHEYFRKMKKSG 303

Query: 181 EALNALTYKVLVKAFWREGKVREAIQAVRDMEQRGIVRAACVYYELARCLSFHGRCQEAL 360
           E+L ALTYKVLV+AFW EG+V EA++AVRDMEQRG+V AA VYYELA CL ++GR Q+A+
Sbjct: 304 ESLKALTYKVLVRAFWEEGRVNEAVEAVRDMEQRGVVGAASVYYELACCLCYNGRWQDAM 363

Query: 361 MEVQKLKKLHRTRPLEVTFTGMILAAMDGGDVNGCLALFEHCKKCCTP 504
           +EV+K+K+L   +PLEV+ TGMI ++MDGG ++ C+++FEH K  C P
Sbjct: 364 LEVEKMKRLRYKKPLEVSLTGMIASSMDGGHIDNCISIFEHMKAHCVP 411


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
           gi|223535436|gb|EEF37106.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 1010

 Score =  243 bits (620), Expect = 1e-62
 Identities = 112/168 (66%), Positives = 140/168 (83%)
 Frame = +1

Query: 1   VLNACVTSHQWKGVSWVFEQLRKSGLRPNGATYGLAMEVMLECGKYDLVHEFYGKMKRSG 180
           VLNACV + QWKGV+WVFEQLRKSGL+PNGATYGLAMEVML  GKYDLVHE + KM RSG
Sbjct: 477 VLNACVPTQQWKGVAWVFEQLRKSGLKPNGATYGLAMEVMLNSGKYDLVHELFRKMNRSG 536

Query: 181 EALNALTYKVLVKAFWREGKVREAIQAVRDMEQRGIVRAACVYYELARCLSFHGRCQEAL 360
           EA  ALTYKVLV+AFW EGKV EA++AVRDME RG+V  A +YYELA CL ++G  Q+A+
Sbjct: 537 EAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVGTASLYYELACCLCYYGMWQDAM 596

Query: 361 MEVQKLKKLHRTRPLEVTFTGMILAAMDGGDVNGCLALFEHCKKCCTP 504
           +EV+K+K L  ++PLEVTFTG+I++++DGG V+ C+++FE+ K  C P
Sbjct: 597 LEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYMKAYCVP 644


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509586|gb|AES90728.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  231 bits (588), Expect = 6e-59
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +1

Query: 1   VLNACVTSHQWKGVSWVFEQLRKSGLRPNGATYGLAMEVMLECGKYDLVHEFYGKMKRSG 180
           VLNACV S QWKGVSWVF+Q+RKS L+PNGATYGLAMEVML+ G YDLVHE + KM+R+G
Sbjct: 352 VLNACVPSKQWKGVSWVFQQMRKSSLKPNGATYGLAMEVMLQSGNYDLVHELFEKMQRNG 411

Query: 181 EALNALTYKVLVKAFWREGKVREAIQAVRDMEQRGIVRAACVYYELARCLSFHGRCQEAL 360
           E   ALTYKV+V+ FW+EGKV EA++AVRDME+RG++  A VYYELA CL   GR Q+A 
Sbjct: 412 EVPEALTYKVMVRTFWKEGKVDEAVKAVRDMERRGVMGTASVYYELACCLCNCGRWQDAT 471

Query: 361 MEVQKLKKLHRTRPLEVTFTGMILAAMDGGDVNGCLALFEHCKKCCTP 504
           +EV+K+K+L   +PLEVTFTGMI ++MDGG ++ C+ +FE+ +  C P
Sbjct: 472 LEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICIFEYMQDHCAP 519


>ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
           gi|297312532|gb|EFH42956.1| EMB1408 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 621

 Score =  230 bits (586), Expect = 1e-58
 Identities = 105/168 (62%), Positives = 137/168 (81%)
 Frame = +1

Query: 1   VLNACVTSHQWKGVSWVFEQLRKSGLRPNGATYGLAMEVMLECGKYDLVHEFYGKMKRSG 180
           +LNACV + QWK VSWVF +LRK+GLRPNGATYGLAMEVMLE GKYD VH+F+ KMK SG
Sbjct: 347 ILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKYDRVHDFFRKMKSSG 406

Query: 181 EALNALTYKVLVKAFWREGKVREAIQAVRDMEQRGIVRAACVYYELARCLSFHGRCQEAL 360
           EA  A+TYKVLV+A WREGK+ EA++AVRDMEQ+G++    VYYELA CL  +GR ++A+
Sbjct: 407 EAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWRDAM 466

Query: 361 MEVQKLKKLHRTRPLEVTFTGMILAAMDGGDVNGCLALFEHCKKCCTP 504
           +EV ++K+L   RPLE+TFTG+I A+++GG V+ C+A+F++ K  C P
Sbjct: 467 LEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDP 514


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