BLASTX nr result
ID: Cephaelis21_contig00026390
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00026390 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA22288.1| polyprotein [Oryza australiensis] 80 1e-13 gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 80 2e-13 gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 80 2e-13 gb|AAQ56391.1| putative polyprotein [Oryza sativa Japonica Group] 80 2e-13 emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 80 2e-13 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 80.5 bits (197), Expect = 1e-13 Identities = 39/86 (45%), Positives = 55/86 (63%) Frame = +1 Query: 1 RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180 R+V+ H +KM GYIE L LGF + +L+ D+ILQSLP S+ F+LNY MN + Sbjct: 127 RLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDR 186 Query: 181 TIPELINMLKTAEETVKKQSPKAVMV 258 T+ EL MLKT EE+++K +M+ Sbjct: 187 TLAELHGMLKTVEESIQKNGHHVMMM 212 >gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1073 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/80 (47%), Positives = 53/80 (66%) Frame = +1 Query: 1 RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180 R+ + H +KM GY E L LGF + +L+ DLILQSLP S+ F++N+ MN ++ Sbjct: 218 RLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 277 Query: 181 TIPELINMLKTAEETVKKQS 240 T+ EL MLKTAEE++KK S Sbjct: 278 TLAELHGMLKTAEESIKKNS 297 >gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1063 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/80 (47%), Positives = 53/80 (66%) Frame = +1 Query: 1 RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180 R+ + H +KM GY E L LGF + +L+ DLILQSLP S+ F++N+ MN ++ Sbjct: 218 RLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 277 Query: 181 TIPELINMLKTAEETVKKQS 240 T+ EL MLKTAEE++KK S Sbjct: 278 TLAELHGMLKTAEESIKKNS 297 >gb|AAQ56391.1| putative polyprotein [Oryza sativa Japonica Group] Length = 390 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/80 (46%), Positives = 53/80 (66%) Frame = +1 Query: 1 RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180 R+ + H +KM GY E L LGF + +L+ DLILQSLP S+ F++N+ MN ++ Sbjct: 21 RLAEGNPVSPHEIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 80 Query: 181 TIPELINMLKTAEETVKKQS 240 T+ E+ MLKTAEE++KK S Sbjct: 81 TLAEVHGMLKTAEESIKKNS 100 >emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] Length = 948 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/80 (47%), Positives = 53/80 (66%) Frame = +1 Query: 1 RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180 R+ + H +KM GY E L LGF + +L+ DLILQSLP S+ F++N+ MN ++ Sbjct: 203 RLAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 262 Query: 181 TIPELINMLKTAEETVKKQS 240 T+ EL MLKTAEE++KK S Sbjct: 263 TLAELHGMLKTAEESIKKNS 282