BLASTX nr result

ID: Cephaelis21_contig00026390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026390
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                      80   1e-13
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    80   2e-13
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      80   2e-13
gb|AAQ56391.1| putative polyprotein [Oryza sativa Japonica Group]      80   2e-13
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]         80   2e-13

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/86 (45%), Positives = 55/86 (63%)
 Frame = +1

Query: 1   RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180
           R+V+      H +KM GYIE L  LGF +  +L+ D+ILQSLP S+  F+LNY MN +  
Sbjct: 127 RLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDR 186

Query: 181 TIPELINMLKTAEETVKKQSPKAVMV 258
           T+ EL  MLKT EE+++K     +M+
Sbjct: 187 TLAELHGMLKTVEESIQKNGHHVMMM 212


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180
           R+ +      H +KM GY E L  LGF +  +L+ DLILQSLP S+  F++N+ MN ++ 
Sbjct: 218 RLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 277

Query: 181 TIPELINMLKTAEETVKKQS 240
           T+ EL  MLKTAEE++KK S
Sbjct: 278 TLAELHGMLKTAEESIKKNS 297


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180
           R+ +      H +KM GY E L  LGF +  +L+ DLILQSLP S+  F++N+ MN ++ 
Sbjct: 218 RLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 277

Query: 181 TIPELINMLKTAEETVKKQS 240
           T+ EL  MLKTAEE++KK S
Sbjct: 278 TLAELHGMLKTAEESIKKNS 297


>gb|AAQ56391.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 390

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/80 (46%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180
           R+ +      H +KM GY E L  LGF +  +L+ DLILQSLP S+  F++N+ MN ++ 
Sbjct: 21  RLAEGNPVSPHEIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 80

Query: 181 TIPELINMLKTAEETVKKQS 240
           T+ E+  MLKTAEE++KK S
Sbjct: 81  TLAEVHGMLKTAEESIKKNS 100


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   RMVKKTSAMQHRLKMNGYIERLTSLGFVMDADLSIDLILQSLPDSYASFVLNYQMNKISS 180
           R+ +      H +KM GY E L  LGF +  +L+ DLILQSLP S+  F++N+ MN ++ 
Sbjct: 203 RLAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNR 262

Query: 181 TIPELINMLKTAEETVKKQS 240
           T+ EL  MLKTAEE++KK S
Sbjct: 263 TLAELHGMLKTAEESIKKNS 282


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