BLASTX nr result

ID: Cephaelis21_contig00026387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026387
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   169   2e-40
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   168   5e-40
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   162   3e-38
ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  169 bits (429), Expect = 2e-40
 Identities = 86/108 (79%), Positives = 91/108 (84%)
 Frame = +3

Query: 117 MSQFWKPGTERPRLVDDEEGGVIVYLAXXXXXXXXXXXXXIEKQRQRLPVYKYRTAILYL 296
           MSQFWKPG+E+PRL+DDEEGGV+ Y A             IEKQRQRLPVYKYRTAILYL
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSN-IEKQRQRLPVYKYRTAILYL 59

Query: 297 VETRATTIIVGETGSGKTTQIPQFLKEAGWADEGRVIACTQPRRLAVQ 440
           VET ATTIIVGETGSGKTTQIPQ+LKEAGWAD GRVIACTQPRRLAVQ
Sbjct: 60  VETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 107


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  169 bits (429), Expect = 2e-40
 Identities = 86/108 (79%), Positives = 91/108 (84%)
 Frame = +3

Query: 117 MSQFWKPGTERPRLVDDEEGGVIVYLAXXXXXXXXXXXXXIEKQRQRLPVYKYRTAILYL 296
           MSQFWKPG+E+PRL+DDEEGGV+ Y A             IEKQRQRLPVYKYRTAILYL
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSN-IEKQRQRLPVYKYRTAILYL 59

Query: 297 VETRATTIIVGETGSGKTTQIPQFLKEAGWADEGRVIACTQPRRLAVQ 440
           VET ATTIIVGETGSGKTTQIPQ+LKEAGWAD GRVIACTQPRRLAVQ
Sbjct: 60  VETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 107


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/108 (76%), Positives = 89/108 (82%)
 Frame = +3

Query: 117 MSQFWKPGTERPRLVDDEEGGVIVYLAXXXXXXXXXXXXXIEKQRQRLPVYKYRTAILYL 296
           M+QFWKPGTE+PRL+DD EGGV+ + +              EKQRQRLPVYKYRTAILYL
Sbjct: 1   MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSSGFGFSSTEKQRQRLPVYKYRTAILYL 60

Query: 297 VETRATTIIVGETGSGKTTQIPQFLKEAGWADEGRVIACTQPRRLAVQ 440
           VET ATTIIVGETGSGKTTQIPQFLKEAGWAD GRVIACTQPRRLAVQ
Sbjct: 61  VETHATTIIVGETGSGKTTQIPQFLKEAGWADGGRVIACTQPRRLAVQ 108


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/108 (73%), Positives = 88/108 (81%)
 Frame = +3

Query: 117 MSQFWKPGTERPRLVDDEEGGVIVYLAXXXXXXXXXXXXXIEKQRQRLPVYKYRTAILYL 296
           M+ FWKPGTE+P L+DDEEGGV+   +             IEKQRQRLPVYKYRTAILYL
Sbjct: 1   MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYVSIEKQRQRLPVYKYRTAILYL 60

Query: 297 VETRATTIIVGETGSGKTTQIPQFLKEAGWADEGRVIACTQPRRLAVQ 440
           VET AT++IVGETGSGKTTQIPQ+LKEAGWAD GR+IACTQPRRLAVQ
Sbjct: 61  VETHATSVIVGETGSGKTTQIPQYLKEAGWADGGRLIACTQPRRLAVQ 108


>ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/109 (72%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
 Frame = +3

Query: 123 QFWKPGTERPRLVDDEEGGVIVY---LAXXXXXXXXXXXXXIEKQRQRLPVYKYRTAILY 293
           QFWKPG+E+PR+++DEEGGV+ +   L+             I  QRQRLPVYKYRTAILY
Sbjct: 4   QFWKPGSEKPRILEDEEGGVVFFGPPLSSAASSSSRFGYASIGSQRQRLPVYKYRTAILY 63

Query: 294 LVETRATTIIVGETGSGKTTQIPQFLKEAGWADEGRVIACTQPRRLAVQ 440
           LVET ATTIIVGETGSGKTTQIPQ+LKEAGWAD GRVIACTQPRRLAVQ
Sbjct: 64  LVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 112


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