BLASTX nr result

ID: Cephaelis21_contig00026377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026377
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...   115   3e-24
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]        115   5e-24
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...   113   1e-23
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   112   3e-23
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi...   111   5e-23

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397  FFAGVPLPRSVASTQIVLLAKKDSPATFADYRPICLCNYLNKIFTRILCLRL*PLFPKLI 218
            FF    +P+ V  T IVL+ KKD P    DYRPI LCN + K+ ++ L  RL P+   L+
Sbjct: 1114 FFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLV 1173

Query: 217  SEEQSAFVKGRDAADNVLLVQECLQHLDKRIRGHN--IIFKLDMMKAFDRVNWDFLQLLL 44
            S+EQSAF++GR   DN LL  EC   + K  + ++    +KLD+ KA+DRV+W FL+L L
Sbjct: 1174 SKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELAL 1233

Query: 43   PRFGFHSRVVNLIM 2
             + GF  R V+ IM
Sbjct: 1234 NKLGFAHRWVSWIM 1247


>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397  FFAGVPLPRSVASTQIVLLAKKDSPATFADYRPICLCNYLNKIFTRILCLRL*PLFPKLI 218
            FF    +P  V  T IVL+ KKD P    DYRPI LCN + K+ ++ L  RL P+   L+
Sbjct: 1026 FFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLV 1085

Query: 217  SEEQSAFVKGRDAADNVLLVQECLQHLDKRIRGHN--IIFKLDMMKAFDRVNWDFLQLLL 44
            S+EQSAF++GR   DN LL  EC   + K  + ++    +KLD+ KA+DRV+W FL+L L
Sbjct: 1086 SKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELAL 1145

Query: 43   PRFGFHSRVVNLIM 2
             + GF  R V+ IM
Sbjct: 1146 NKLGFAHRWVSWIM 1159


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397 FFAGVPLPRSVASTQIVLLAKKDSPATFADYRPICLCNYLNKIFTRILCLRL*PLFPKLI 218
           F  G  LP  +  T IVL+ K  +P    ++RPI LCN L KI +++L LRL     ++I
Sbjct: 35  FLNGGTLPADINHTTIVLIPKTRNPQGMTEFRPISLCNVLYKICSKVLALRLREFLDEII 94

Query: 217 SEEQSAFVKGRDAADNVLLVQECLQHLDKRIRGHN--IIFKLDMMKAFDRVNWDFLQLLL 44
           SEEQSAFV GR   DNVL+  EC+ +L KR +G N     KLDM KA+D V W++LQ ++
Sbjct: 95  SEEQSAFVPGRLITDNVLISYECIHYL-KRRKGKNGACAIKLDMAKAYDPVEWEYLQGIM 153

Query: 43  PRFGFHSRVVNLIM 2
            + GFH   V +IM
Sbjct: 154 LKLGFHEAFVRMIM 167


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
 Frame = -2

Query: 370 SVASTQIVLLAKKDSPATFADYRPICLCNYLNKIFTRILCLRL*PLFPKLISEEQSAFVK 191
           ++++T I L+ K DSP T+ D+RPI LCN L KI T++L  RL P    LI   QS+F+ 
Sbjct: 486 AISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLP 545

Query: 190 GRDAADNVLLVQECLQHL--DKRIRGHNIIFKLDMMKAFDRVNWDFLQLLLPRFGFHSRV 17
           GR  ADN +++QE L  +   KR +G+ + FKLD+ KAFD VNWDFL   L  FGF   +
Sbjct: 546 GRGTADNSIILQEILHFMKRSKRKKGY-VAFKLDLEKAFDNVNWDFLNSCLLDFGFPDII 604

Query: 16  VNLIM 2
           V LIM
Sbjct: 605 VKLIM 609


>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
            gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
            sativa Indica Group] gi|116309230|emb|CAH66320.1|
            OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 2/128 (1%)
 Frame = -2

Query: 397  FFAGVPLPRSVASTQIVLLAKKDSPATFADYRPICLCNYLNKIFTRILCLRL*PLFPKLI 218
            FF    +P  V  T IVL+ KKD P    DYRPI LCN + K+ ++ L  RL P+   L+
Sbjct: 1026 FFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLV 1085

Query: 217  SEEQSAFVKGRDAADNVLLVQECLQHLDKRIRGHN--IIFKLDMMKAFDRVNWDFLQLLL 44
            S+EQSAF++GR   DN LL  EC   + K  + ++    +KLD+ KA+DRV+W FL+L L
Sbjct: 1086 SKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELAL 1145

Query: 43   PRFGFHSR 20
             + GF  R
Sbjct: 1146 NKLGFAHR 1153


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