BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026376
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   5e-16
emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]              54   2e-15
emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]              54   2e-14
emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]              54   2e-14
ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group] g...    52   3e-14

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 58.5 bits (140), Expect(2) = 5e-16
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +2

Query: 2   ST*IVLLPKKLSPNTFADFYPINLFKFLNNIFTRIICDRISSLLSHLISDEQSTFLKGGD 181
           +T I L+PK  SPNT+ DF PI+L   L  I T+++  R+   L++LI   QS+FL G  
Sbjct: 489 NTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPGRG 548

Query: 182 ISNNILLAQEVTQQLHR 232
            ++N ++ QE+   + R
Sbjct: 549 TADNSIILQEILHFMKR 565



 Score = 50.4 bits (119), Expect(2) = 5e-16
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +1

Query: 259 KMDMMKAFDRISWPFQNSLLLKFGFHHSFL*LIMHNLSSSHFSVL 393
           K+D+ KAFD ++W F NS LL FGF    + LIMH +SS+++S+L
Sbjct: 576 KLDLEKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLL 620


>emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 53.9 bits (128), Expect(2) = 2e-15
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 53  DFYPINLFKFLNNIFTRIICDRISSLLSHLISDEQSTFLKGGDISNNILLAQEVTQQLHR 232
           +F PI+L   +  I  R+  DR++S+L  +IS+ Q  F+KG +I  NI LAQE+TQ+ +R
Sbjct: 2   NFRPISLCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNR 61



 Score = 53.1 bits (126), Expect(2) = 2e-15
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +1

Query: 241 GHNLILKMDMMKAFDRISWPFQNSLLLKFGFHHSFL*LIMHNLSSSHFSVL 393
           GHN+I+K+DM KA+DR+ W F   +LL+FGFH  ++  I    ++  FSVL
Sbjct: 65  GHNVIIKLDMGKAYDRLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVL 115


>emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 53.9 bits (128), Expect(2) = 2e-14
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 53  DFYPINLFKFLNNIFTRIICDRISSLLSHLISDEQSTFLKGGDISNNILLAQEVTQQLHR 232
           +F PI+L   +  I  R+  DR++S+L  +IS+ Q  F+KG +I  NI LAQE+TQ+ +R
Sbjct: 2   NFRPISLCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNR 61



 Score = 50.1 bits (118), Expect(2) = 2e-14
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 241 GHNLILKMDMMKAFDRISWPFQNSLLLKFGFHHSFL*LIMHNLSSSHFSVL 393
           GHN+I+K DM +A+DR+ W F   +LL+FGFH  ++  I    ++  FSVL
Sbjct: 65  GHNVIIKPDMGEAYDRLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVL 115


>emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 53.5 bits (127), Expect(2) = 2e-14
 Identities = 26/59 (44%), Positives = 39/59 (66%)
 Frame = +2

Query: 56  FYPINLFKFLNNIFTRIICDRISSLLSHLISDEQSTFLKGGDISNNILLAQEVTQQLHR 232
           F PI+L   +  I  R+  DR++S+L  +IS+ Q  F+KG +I  NI LAQE+TQ+ +R
Sbjct: 3   FRPISLCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNR 61



 Score = 50.1 bits (118), Expect(2) = 2e-14
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 241 GHNLILKMDMMKAFDRISWPFQNSLLLKFGFHHSFL*LIMHNLSSSHFSVL 393
           GHN+I+K+DM KA+D + W F   +LL+FGFH  ++  I    ++  FSVL
Sbjct: 65  GHNVIIKLDMGKAYDWLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVL 115


>ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group]
           gi|125597263|gb|EAZ37043.1| hypothetical protein
           OsJ_21387 [Oryza sativa Japonica Group]
           gi|255677053|dbj|BAF19575.2| Os06g0484800 [Oryza sativa
           Japonica Group]
          Length = 935

 Score = 52.0 bits (123), Expect(2) = 3e-14
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +1

Query: 244 HNLILKMDMMKAFDRISWPFQNSLLLKFGFHHSFL*LIMHNLSSSHFSV 390
           H  ++K+D+ KAFDR+ W F  + L + GFHH F+ L++  ++SS FSV
Sbjct: 389 HAFLIKIDLSKAFDRLEWDFIANALQRKGFHHHFINLVLSCINSSSFSV 437



 Score = 50.8 bits (120), Expect(2) = 3e-14
 Identities = 29/70 (41%), Positives = 39/70 (55%)
 Frame = +2

Query: 5   T*IVLLPKKLSPNTFADFYPINLFKFLNNIFTRIICDRISSLLSHLISDEQSTFLKGGDI 184
           T IVL+PKK    +  DF PI+L      I  + I +RI   L   I D Q  F+ G  I
Sbjct: 308 TNIVLIPKKNRSISPKDFRPISLCNVPYKILAKSIANRIKGKLPDFICDSQHAFIPGRRI 367

Query: 185 SNNILLAQEV 214
           +NNI++AQE+
Sbjct: 368 ANNIIIAQEI 377