BLASTX nr result

ID: Cephaelis21_contig00026343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026343
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   236   4e-60
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...   217   1e-54
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...   213   4e-53
ref|XP_002520859.1| conserved hypothetical protein [Ricinus comm...   204   1e-50

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  236 bits (601), Expect = 4e-60
 Identities = 119/180 (66%), Positives = 140/180 (77%)
 Frame = -3

Query: 542 MENSDDPCDGCVNGDEDERIDNLPSTSTSSSYKLFGRQSSVHQIMGGGKAADVILWRRRH 363
           M++S+DP + CV+GD         STS    Y+LF R+SS+HQIMGGGKAADV+LW+RR 
Sbjct: 1   MDSSEDPSNACVDGDA--------STSGGPGYRLFDRRSSIHQIMGGGKAADVLLWKRRR 52

Query: 362 VSFGVIVAATVAWFLFERSGLPVLSISCDVLLILIVLQFIRANYAVLRKRQLRPLPELVL 183
           VS G IV ATVAW LFERSGL  LSI  DVLLILIV+ F+RANYA  R +QL+ LPEL L
Sbjct: 53  VSCGTIVVATVAWILFERSGLSFLSICSDVLLILIVVLFLRANYAAFRNKQLKSLPELEL 112

Query: 182 SEEMVNNAAASFRAKVNYILLMAHDITLGKDFKLFFKVVIAFWLLSVIGSLLSFCTVVYI 3
           SEEMVN+ A SFR K+NY+LLMAHDITLGKDF+LFFKVV+  WLLSV+GS  SF T+ YI
Sbjct: 113 SEEMVNSVAGSFRVKINYLLLMAHDITLGKDFRLFFKVVLGLWLLSVVGSSFSFFTLAYI 172


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  224 bits (571), Expect = 1e-56
 Identities = 119/189 (62%), Positives = 142/189 (75%), Gaps = 9/189 (4%)
 Frame = -3

Query: 542 MENSDDPCDGCV-NGDEDERIDNLPSTSTS--------SSYKLFGRQSSVHQIMGGGKAA 390
           M+NS D  D    NG  D R D   STS++        S Y+LF RQ S+HQ+MG GKAA
Sbjct: 1   MDNSSDVIDTVSGNGGGDSRNDAAASTSSAPSSPRAITSGYRLFDRQDSLHQLMGAGKAA 60

Query: 389 DVILWRRRHVSFGVIVAATVAWFLFERSGLPVLSISCDVLLILIVLQFIRANYAVLRKRQ 210
           DV+LW+  HVSFGVI+ ATV+WF+FERSGLP L+I  DVLLILIVL F+RAN A +  +Q
Sbjct: 61  DVLLWKWWHVSFGVIMVATVSWFIFERSGLPFLTICSDVLLILIVLLFVRANIADMINKQ 120

Query: 209 LRPLPELVLSEEMVNNAAASFRAKVNYILLMAHDITLGKDFKLFFKVVIAFWLLSVIGSL 30
           L+ LPELVLSEEMVN+AAASFR K+N +LLMAHDITLGKDF+LFFKVV+  WLLS +GS 
Sbjct: 121 LQSLPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVFLWLLSTVGSY 180

Query: 29  LSFCTVVYI 3
            SF T+ YI
Sbjct: 181 FSFFTLAYI 189


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score =  217 bits (553), Expect = 1e-54
 Identities = 105/169 (62%), Positives = 134/169 (79%)
 Frame = -3

Query: 509 VNGDEDERIDNLPSTSTSSSYKLFGRQSSVHQIMGGGKAADVILWRRRHVSFGVIVAATV 330
           ++GD D R +      +SS Y+L GRQ +VHQ MGGGKAAD++LWRRRH+S GVI+ +TV
Sbjct: 7   IDGDFDGRNEG----GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTV 62

Query: 329 AWFLFERSGLPVLSISCDVLLILIVLQFIRANYAVLRKRQLRPLPELVLSEEMVNNAAAS 150
           AW +FE SGLP LS+S DVLLI+I++ F+ A  +  R RQL  LPELVLSEEMVN+AAAS
Sbjct: 63  AWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAAS 122

Query: 149 FRAKVNYILLMAHDITLGKDFKLFFKVVIAFWLLSVIGSLLSFCTVVYI 3
           FR K+N++L+MAHD+T+G DF+LFFKVVI  WLLS IGS +S CT++YI
Sbjct: 123 FRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYI 171


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score =  213 bits (541), Expect = 4e-53
 Identities = 105/170 (61%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
 Frame = -3

Query: 509 VNGDEDERIDNLPSTSTSSSYKLFGRQSSVHQIMGGGKAADVILWRRRHVSFGVIVAATV 330
           ++GD D R +      +SS Y+L GRQ +VHQ MGGGKAAD++LWRRRH+S GVI+ +TV
Sbjct: 7   IDGDFDGRNEG----GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTV 62

Query: 329 AWFLFERSGLPVLSISCDVLLILIVLQFIRANYAVLRKRQLRPLPELVLSEEMVNNAAAS 150
           AW +FE SGLP LS+S DVLLI+I++ F+ A  +  R RQL  LPELVLSEEMVN+AAAS
Sbjct: 63  AWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAAS 122

Query: 149 FRAKVNYILLMAHDITLGKDFKLFFK-VVIAFWLLSVIGSLLSFCTVVYI 3
           FR K+N++L+MAHD+T+G DF+LFFK VVI  WLLS IGS +S CT++YI
Sbjct: 123 FRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYI 172


>ref|XP_002520859.1| conserved hypothetical protein [Ricinus communis]
           gi|223539990|gb|EEF41568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  204 bits (520), Expect = 1e-50
 Identities = 111/163 (68%), Positives = 128/163 (78%), Gaps = 3/163 (1%)
 Frame = -3

Query: 542 MENSDDPCDGC-VNGDEDERIDNLPSTSTSSS--YKLFGRQSSVHQIMGGGKAADVILWR 372
           MENSDD  D   VNG E  R D   S+S SSS  Y+LFGRQ+   Q MGGGKAADV+LW+
Sbjct: 1   MENSDDFVDKVDVNGGET-RNDYTASSSCSSSSRYRLFGRQAPFQQFMGGGKAADVLLWK 59

Query: 371 RRHVSFGVIVAATVAWFLFERSGLPVLSISCDVLLILIVLQFIRANYAVLRKRQLRPLPE 192
           R HVSF VI+ ATVAWF+FERSGLP L+I  DVLL++ VL FI AN+A +R +Q + LPE
Sbjct: 60  RWHVSFSVIIIATVAWFIFERSGLPFLTICSDVLLVVTVLLFIHANFAAIRNKQPQSLPE 119

Query: 191 LVLSEEMVNNAAASFRAKVNYILLMAHDITLGKDFKLFFKVVI 63
           LVLSEEMVNNAAASFR K+N +LLMAHDIT+GKDFKLFFKV I
Sbjct: 120 LVLSEEMVNNAAASFRVKINNVLLMAHDITIGKDFKLFFKVSI 162


Top