BLASTX nr result

ID: Cephaelis21_contig00026278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026278
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   190   8e-46
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   187   8e-45
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...   185   2e-44
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...   184   4e-44
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   181   4e-43

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  190 bits (483), Expect = 8e-46
 Identities = 108/361 (29%), Positives = 180/361 (49%), Gaps = 2/361 (0%)
 Frame = -1

Query: 1531 RIHWASWERLTKAKEMGGLEFKNLESVNDSLLAKQLWRMLNDPELLVSRVMRGKYFPNQE 1352
            +IHW SW+RLT  K+ GG  FK+L+  N +LLAKQ WR+L +   L SRV + +YF N +
Sbjct: 834  KIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSD 893

Query: 1351 LLNVEPKGXXXXXXXXXXXXXXXLQRGLRWRVVDGKSIRVWEDQWIQGEAGARPLGRRPL 1172
             L+                    L +GLR  + +G+   VW D+W+   +  RPL RR  
Sbjct: 894  FLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRF 953

Query: 1171 DCRIVNVSQLLDEQGMGWNKQLVEAMFT-EEVANNILDTPICYTGFADQLVWIPENHGYY 995
                + VSQL+D     WN  ++  +F  ++V   +   P+ +    D   W+  ++G Y
Sbjct: 954  INVDLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFK--EDSFCWLHSHNGLY 1011

Query: 994  TVKSAYR-VAQQEKERSSNEAESSIGRLENKKMWGRLWSLPVKPKLKYFLWKCIQGWLPT 818
            +VK+ Y  +++Q   R   EA+    +     ++ ++W+L   PK++ FLWK + G +P 
Sbjct: 1012 SVKTGYEFLSKQVHHRLYQEAKV---KPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPV 1068

Query: 817  SYAIKKRGVVCDDVCKRCGMGIETVGHVFFQCEESMLVWKMAPFKWDCQQVLSASFTCWW 638
               ++ RG+  DD C  C    ET+ H+ F+C  +  VW +        +  ++ +T   
Sbjct: 1069 EDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMS 1128

Query: 637  VEINKMNNHKSVQKGIELSVYLLWQIWKARNLWYFQGEKMDTATIVHKAIQEWEEFDGVQ 458
              I+    +        +S ++LW +WK RN   F+G+   T T+V KA + + E+   Q
Sbjct: 1129 RLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQ 1188

Query: 457  T 455
            T
Sbjct: 1189 T 1189


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score =  187 bits (474), Expect = 8e-45
 Identities = 108/357 (30%), Positives = 181/357 (50%), Gaps = 4/357 (1%)
 Frame = -1

Query: 1531 RIHWASWERLTKAKEMGGLEFKNLESVNDSLLAKQLWRMLNDPELLVSRVMRGKYFPNQE 1352
            +I W +W +L   K+MGGL  ++L+  N +LLAKQ WR+L  P  L++RV + KYFP + 
Sbjct: 290  KIPWVAWSKLNDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKER 349

Query: 1351 LLNVEPKGXXXXXXXXXXXXXXXLQRGLRWRVVDGKSIRVWEDQWIQGEAGARPLGRRPL 1172
            LL+ +                  + RGL++   +G +I++W+D W+       P+G    
Sbjct: 350  LLDAKATSQSSYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDS 409

Query: 1171 DCRIVNVSQLLDEQGMGWNKQLVEAMFTEEVANNILDTPICYTGFADQLVWIPENHGYYT 992
                + VS LL E    WN+ L+  +  +    +I       TG  D + WI  + G Y+
Sbjct: 410  IYSQLKVSDLLIEG--RWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYS 467

Query: 991  VKSAYRVAQQEKERSSNEAESSIGRLENKKMWGRLWSLPVKPKLKYFLWKCIQGWLPTSY 812
            VKS Y + ++  ++  + +  S   +  + ++  +W     PK+K+F W+     LPT+ 
Sbjct: 468  VKSGYHLLRKLSQQ-QHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAG 526

Query: 811  AIKKRGVVCDDVCKRCGMGIETVGHVFFQCEESMLVWKMAPFK-WDCQQVLSASFTCWWV 635
             +K+R ++ DD C+RCG   E V H+ FQC  S  +W+ A  K      ++S SF     
Sbjct: 527  NLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLE 586

Query: 634  EINKMNNHKSVQKGIELSVYLLWQIWKARNLWYFQGEKMDTATIVHKAI---QEWEE 473
             I K+N  +S +K + L  ++ W+IWK RN   F  ++      + KA+   Q+W+E
Sbjct: 587  SIQKLN--QSARKDVSLFPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKE 641


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score =  185 bits (470), Expect = 2e-44
 Identities = 101/282 (35%), Positives = 152/282 (53%), Gaps = 4/282 (1%)
 Frame = -1

Query: 1531 RIHWASWERLTKAKEMGGLEFKNLESVNDSLLAKQLWRMLNDPELLVSRVMRGKYFPNQE 1352
            ++HW SWE L + KE GG+ +++L   N ++LA+Q WR++ +P  L ++V+R KYFP  +
Sbjct: 291  KVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYFPTGD 350

Query: 1351 LLNVEPKGXXXXXXXXXXXXXXXLQRGLRWRVVDGKSIRVWEDQWIQGEAGARPLGRRPL 1172
            L+ V  K                L++GL WRV DG +I +W D W+      RP+   P 
Sbjct: 351  LMAVREKPGISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPSGITRRPI--TPR 408

Query: 1171 DCRIVN-VSQLLDEQGMGWNKQLVEAMFTEEVANNILDTPICYTGFADQLVWIPENHGYY 995
               +VN V+ L+D     W+K+L+E +F EE    IL  PI   G  D L W  +N G +
Sbjct: 409  GRTVVNKVTDLIDPTIGKWDKELIEGLFWEEDVKQILTIPI-RAGVEDGLAWHFDNRGIF 467

Query: 994  TVKSAYRVAQQEKER--SSNEAESSIGRLENKKM-WGRLWSLPVKPKLKYFLWKCIQGWL 824
            +VKSAY V + E+ R     +  SS G+   +K+ W ++W LP  PK+K+F+W      L
Sbjct: 468  SVKSAYHVLEDERRRHKPKQDGASSSGQTNMEKLCWQQIWKLPYLPKVKHFIWHLAHNSL 527

Query: 823  PTSYAIKKRGVVCDDVCKRCGMGIETVGHVFFQCEESMLVWK 698
            P   +I+KRG+  D  C  C    E  GH F +C+     W+
Sbjct: 528  PFRMSIQKRGMQIDTRCPVCHRQNEDGGHYFLKCKLMRKCWQ 569


>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score =  184 bits (468), Expect = 4e-44
 Identities = 109/335 (32%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
 Frame = -1

Query: 1531 RIHWASWERLTKAKEMGGLEFKNLESVNDSLLAKQLWRMLNDPELLVSRVMRGKYFPNQE 1352
            ++HW +W +LTK+K  GGL F+++++ N +LLA+Q WR++++P  L +RV++ KY+PN  
Sbjct: 189  KVHWKAWSQLTKSKNAGGLGFRDMKAFNQALLARQAWRLIDNPVSLCARVLKAKYYPNGC 248

Query: 1351 LLNVEPKGXXXXXXXXXXXXXXXLQRGLRWRVVDGKSIRVWEDQWIQGEAGARPLGRRPL 1172
            L++    G               L+ GL WR+ +G  +R+W D WI   +  R +     
Sbjct: 249  LMDTVFSGNASPTWRAIEHGLELLKEGLVWRIGNGTRVRIWRDPWIP-RSSTRKVITSQG 307

Query: 1171 DCRIVNVSQLLDEQGMGWNKQLVEAMFTEEVANNILDTPICYTGFADQLVWIPENHGYYT 992
             CRI  V+ LLD     WN+QLV  +F    A+ IL       G  D L W  E  G +T
Sbjct: 308  RCRIKWVADLLDAN-TNWNEQLVRQIFLPMDADAILSIRTSRQGEDDFLAWHLEKSGIFT 366

Query: 991  VKSAYRVAQQEKERSSNEAESSIGRLENKKMWGRLWSLPVKPKLKYFLWKCIQGWLPTSY 812
            VK+AYR+A + K  S N   S      +K +W  +WS PV PK++ F W+     L T  
Sbjct: 367  VKTAYRLAIENKLNSKNSNASGSSIEGSKSLWNTIWSCPVPPKVRIFAWRVASDCLATRV 426

Query: 811  AIKKRGVVCDDVCKRCGMGIETVGHVFFQCEESMLVWKMAPFKWDC--QQVLSASFTCW- 641
              K R +   D C  CG   ET  H   +C  +  +W      W    Q   +   T W 
Sbjct: 427  NKKGRRLEALDTCTLCGTESETAFHALCRCTYARALWAALREVWQIPDQTTWTYQGTKWL 486

Query: 640  ---WVEINKMNNHKSVQKGIELSVYLLWQIWKARN 545
                V++++M             + LLW+IW  RN
Sbjct: 487  LLTLVKLSEMER--------MFILMLLWRIWHVRN 513


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  181 bits (460), Expect = 4e-43
 Identities = 108/376 (28%), Positives = 178/376 (47%), Gaps = 11/376 (2%)
 Frame = -1

Query: 1531 RIHWASWERLTKAKEMGGLEFKNLESVNDSLLAKQLWRMLNDPELLVSRVMRGKYFPNQE 1352
            R+ W +WE+L   K+ GGL  +N +  N +LLAKQ WR+L  P+ L++RV++GKYFP   
Sbjct: 844  RVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSN 903

Query: 1351 LLNVEPKGXXXXXXXXXXXXXXXLQRGLRWRVVDGKSIRVWEDQWIQG---------EAG 1199
             L                     +Q+G+   + DG+   +W D W+           E  
Sbjct: 904  FLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGDPWVPSLERYSIAATEGV 963

Query: 1198 ARPLGRRPLDCRIVNVSQLLDEQGMGWNKQLVEAMFTEEVANNILDTPICYTGFADQLVW 1019
            +   G + + C +++  +        WN +L+  +F    +  I   P+      DQ +W
Sbjct: 964  SEDDGPQKV-CELISNDR--------WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMW 1014

Query: 1018 IPENHGYYTVKSAYRVAQQEKERSSNEAESSIGRLENKKMWGRLWSLPVKPKLKYFLWKC 839
            +   +G +TV+SAY     E  ++      S  R  N K+W ++W   + PK+K F WK 
Sbjct: 1015 MMSKNGQFTVRSAYYHELLEDRKTG----PSTSRGPNLKLWQKIWKAKIPPKVKLFSWKA 1070

Query: 838  IQGWLPTSYAIKKRGVVCDDVCKRCGMGIETVGHVFFQCEESMLVWKMAPFKWDCQQVLS 659
            I   L     ++KRG+  D  C RCG   ET  H+ + C+ES   W ++P +     + +
Sbjct: 1071 IHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEA 1130

Query: 658  ASFTCWWVEINKMNNHKSVQKGIELSVYLLWQIWKARNLWYFQGEKMDTATIVHKAIQEW 479
             SF   WVE + ++ HK  +    L   + W IW  RN W F+ +K+    +V +A++  
Sbjct: 1131 GSFRI-WVE-SLLDTHKDTE-WWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGV 1187

Query: 478  EEFDG--VQTMPTKTV 437
             EF+     T P +T+
Sbjct: 1188 MEFEEECAHTSPVETL 1203


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