BLASTX nr result

ID: Cephaelis21_contig00026233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026233
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262...   151   1e-34
ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792...   148   1e-33
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm...   147   1e-33
gb|AFK39204.1| unknown [Lotus japonicus]                              147   2e-33
ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p...   147   2e-33

>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
          Length = 116

 Score =  151 bits (381), Expect = 1e-34
 Identities = 73/103 (70%), Positives = 83/103 (80%)
 Frame = +3

Query: 132 IGISGGKEPEPENLNSVSTVKKLVSRRLLVGIKDGRFFLGLFYCMDKQGNIILQDAIEYR 311
           I +   +   P   N V+ V+ L+ RR+LVG+ DGRFFLG F+CMDKQGNIILQD +EYR
Sbjct: 12  IHVESSEGSNPNGSNPVTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYR 71

Query: 312 STRSVSPSPMEQRGLGLILIPFSCRTSCHVDCSIEEQMSLLSL 440
           STR  SPSPMEQR LGLILIPFSCRTSCHVDCSIEEQ+SLLSL
Sbjct: 72  STRRSSPSPMEQRCLGLILIPFSCRTSCHVDCSIEEQLSLLSL 114


>ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792908 [Glycine max]
          Length = 107

 Score =  148 bits (373), Expect = 1e-33
 Identities = 73/101 (72%), Positives = 83/101 (82%)
 Frame = +3

Query: 156 PEPENLNSVSTVKKLVSRRLLVGIKDGRFFLGLFYCMDKQGNIILQDAIEYRSTRSVSPS 335
           P   +  +VS  +KL+ RR+LVGIKDGRFFLG FYC+DKQGNIILQDA+EYRSTR  SPS
Sbjct: 7   PVEGSSGTVSRARKLLFRRMLVGIKDGRFFLGSFYCIDKQGNIILQDAVEYRSTRQSSPS 66

Query: 336 PMEQRGLGLILIPFSCRTSCHVDCSIEEQMSLLSLQRQN*H 458
           PMEQR LGLILIP SCRTSCHVDC+I EQ+SLLSL +   H
Sbjct: 67  PMEQRCLGLILIPSSCRTSCHVDCAIHEQLSLLSLNQTPPH 107


>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
           gi|223541066|gb|EEF42622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  147 bits (372), Expect = 1e-33
 Identities = 73/112 (65%), Positives = 85/112 (75%)
 Frame = +3

Query: 108 QKATSVGQIGISGGKEPEPENLNSVSTVKKLVSRRLLVGIKDGRFFLGLFYCMDKQGNII 287
           +KA  V         +    +   VS V+KL+ R++LVGIKDGRFFLG F+C+DKQGNII
Sbjct: 6   EKAMEVSAAQPGSSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGNII 65

Query: 288 LQDAIEYRSTRSVSPSPMEQRGLGLILIPFSCRTSCHVDCSIEEQMSLLSLQ 443
           LQDA+EYRSTR  SPSPMEQR LGLILIP SCRT+CHVDCSIEEQ+SL  LQ
Sbjct: 66  LQDAVEYRSTRRTSPSPMEQRCLGLILIPASCRTTCHVDCSIEEQLSLFKLQ 117


>gb|AFK39204.1| unknown [Lotus japonicus]
          Length = 111

 Score =  147 bits (371), Expect = 2e-33
 Identities = 76/116 (65%), Positives = 91/116 (78%)
 Frame = +3

Query: 96  MDNEQKATSVGQIGISGGKEPEPENLNSVSTVKKLVSRRLLVGIKDGRFFLGLFYCMDKQ 275
           M+ E +     Q+G S       ++ + VS V+KL+ RR+LVGIKDGRFFLG FYC+DKQ
Sbjct: 1   MEQEAEQPIPVQVGTS-------DSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQ 53

Query: 276 GNIILQDAIEYRSTRSVSPSPMEQRGLGLILIPFSCRTSCHVDCSIEEQMSLLSLQ 443
           GNIILQDA+EYRSTR  SPSPMEQR LGLILIP SCR +CHVDCSI+EQ+SLLSL+
Sbjct: 54  GNIILQDAVEYRSTRRSSPSPMEQRCLGLILIPSSCRATCHVDCSIDEQLSLLSLR 109


>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|357447245|ref|XP_003593898.1| Small
           nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482944|gb|AES64147.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482946|gb|AES64149.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|388515765|gb|AFK45944.1| unknown
           [Medicago truncatula]
          Length = 113

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/105 (68%), Positives = 86/105 (81%)
 Frame = +3

Query: 132 IGISGGKEPEPENLNSVSTVKKLVSRRLLVGIKDGRFFLGLFYCMDKQGNIILQDAIEYR 311
           + + GG     E+ + VS V+KL+ R++LVGIKDGRFFLG FYCMDKQGNIILQD +EYR
Sbjct: 9   VPVQGGSSDSLES-DRVSRVRKLLFRQMLVGIKDGRFFLGNFYCMDKQGNIILQDTVEYR 67

Query: 312 STRSVSPSPMEQRGLGLILIPFSCRTSCHVDCSIEEQMSLLSLQR 446
           STR  SPSPMEQR +GLILIP SCR SCHVDCS++EQ+SLLSL +
Sbjct: 68  STRRSSPSPMEQRCIGLILIPSSCRMSCHVDCSVDEQLSLLSLYK 112


Top