BLASTX nr result

ID: Cephaelis21_contig00026005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00026005
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...    97   2e-18
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...    96   2e-18
ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...    94   9e-18
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...    94   9e-18

>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/63 (79%), Positives = 52/63 (82%)
 Frame = -1

Query: 189 MPVNLTANAISAITAGDVNAKPLVQVLDIKLISATQERYRLLISDSVLTQHAMLATQLND 10
           MPVNLT NAIS I  GDVN KPLVQV+DIK I + QERYR LISDSV TQHAMLATQLND
Sbjct: 1   MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60

Query: 9   LVK 1
            VK
Sbjct: 61  RVK 63


>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/63 (77%), Positives = 54/63 (85%)
 Frame = -1

Query: 189 MPVNLTANAISAITAGDVNAKPLVQVLDIKLISATQERYRLLISDSVLTQHAMLATQLND 10
           MPVNLT NAI+AI  GDVN+KPLVQVLDIKLI  +QERYR L+SD+V TQ AMLATQLND
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60

Query: 9   LVK 1
            VK
Sbjct: 61  RVK 63


>ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|222872440|gb|EEF09571.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/63 (76%), Positives = 53/63 (84%)
 Frame = -1

Query: 189 MPVNLTANAISAITAGDVNAKPLVQVLDIKLISATQERYRLLISDSVLTQHAMLATQLND 10
           MPVNLT NAI+ I  GDVN KPLVQVLDIK + + QER+RLL+SDSVLTQHAML TQLND
Sbjct: 1   MPVNLTPNAIAMINGGDVNLKPLVQVLDIKQMGSAQERFRLLVSDSVLTQHAMLGTQLND 60

Query: 9   LVK 1
            VK
Sbjct: 61  RVK 63


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/63 (77%), Positives = 54/63 (85%)
 Frame = -1

Query: 189 MPVNLTANAISAITAGDVNAKPLVQVLDIKLISATQERYRLLISDSVLTQHAMLATQLND 10
           MPV+LT NAISAI AGDVN+KPLVQVLDIKLI   QERY LLISD+V  + AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 9   LVK 1
           +VK
Sbjct: 61  VVK 63


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/63 (77%), Positives = 54/63 (85%)
 Frame = -1

Query: 189 MPVNLTANAISAITAGDVNAKPLVQVLDIKLISATQERYRLLISDSVLTQHAMLATQLND 10
           MPV+LT NAISAI AGDVN+KPLVQVLDIKLI   QERY LLISD+V  + AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 9   LVK 1
           +VK
Sbjct: 61  VVK 63


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