BLASTX nr result

ID: Cephaelis21_contig00025871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025871
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28186.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ...   157   1e-36
ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36

>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/120 (73%), Positives = 103/120 (85%)
 Frame = +2

Query: 2   SVLQSLLGSCRIYGNVDLAARLTDALIQMGPGESGSYVLMSNLFAEKGLWEKAAKIRKGM 181
           SVLQSLLG+CRI+GNVD+A R+ D LI+M P  SGSYVLMSNL+AEKG WEK AKIRKGM
Sbjct: 623 SVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGM 682

Query: 182 RDKGVRKEIAFSWVDASGANDSLYMHGFSADDKSHPKSEGIYRMAELLGSEMKYLEKEKE 361
           R++GVRKEI FSWVD   A+ SLY+HGFS+DDK HP+SE IYRMAE LG EMK+LEKE++
Sbjct: 683 RERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKFLEKERK 742


>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
            mitochondrial [Vitis vinifera]
          Length = 773

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/120 (73%), Positives = 103/120 (85%)
 Frame = +2

Query: 2    SVLQSLLGSCRIYGNVDLAARLTDALIQMGPGESGSYVLMSNLFAEKGLWEKAAKIRKGM 181
            SVLQSLLG+CRI+GNVD+A R+ D LI+M P  SGSYVLMSNL+AEKG WEK AKIRKGM
Sbjct: 646  SVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGM 705

Query: 182  RDKGVRKEIAFSWVDASGANDSLYMHGFSADDKSHPKSEGIYRMAELLGSEMKYLEKEKE 361
            R++GVRKEI FSWVD   A+ SLY+HGFS+DDK HP+SE IYRMAE LG EMK+LEKE++
Sbjct: 706  RERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKFLEKERK 765


>ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/119 (64%), Positives = 95/119 (79%)
 Frame = +2

Query: 2   SVLQSLLGSCRIYGNVDLAARLTDALIQMGPGESGSYVLMSNLFAEKGLWEKAAKIRKGM 181
           SVLQSLLG+CR++GNVD+  R+ DAL++M P ESGSYVLMSNL+AE G WE  AK+RK M
Sbjct: 634 SVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRM 693

Query: 182 RDKGVRKEIAFSWVDASGANDSLYMHGFSADDKSHPKSEGIYRMAELLGSEMKYLEKEK 358
           R KGV+KE+ FSWVD  G + SL +HGFS+ D SHP+SE I RMAE LG EMK+L +E+
Sbjct: 694 RVKGVKKEVGFSWVDVGGIDSSLSLHGFSSGDTSHPQSEAICRMAECLGFEMKFLREEE 752


>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344437|ref|XP_003636296.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|358345563|ref|XP_003636846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502231|gb|AES83434.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502781|gb|AES83984.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355521707|gb|AET02161.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/112 (66%), Positives = 94/112 (83%)
 Frame = +2

Query: 2   SVLQSLLGSCRIYGNVDLAARLTDALIQMGPGESGSYVLMSNLFAEKGLWEKAAKIRKGM 181
           SVLQSLLGSC+++GNV++A R+ D+LIQM PG SG YVLM+NL+AEKG WEK A++RKGM
Sbjct: 658 SVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGM 717

Query: 182 RDKGVRKEIAFSWVDASGANDSLYMHGFSADDKSHPKSEGIYRMAELLGSEM 337
           R +GV+KE+ FSWVD +   DSL++HGFS+ DKSHP+SE I RMAE LG +M
Sbjct: 718 RGRGVKKEVGFSWVDVANV-DSLHLHGFSSGDKSHPESETIDRMAEFLGLQM 768


>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
            mitochondrial-like [Glycine max]
          Length = 895

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/120 (60%), Positives = 97/120 (80%)
 Frame = +2

Query: 2    SVLQSLLGSCRIYGNVDLAARLTDALIQMGPGESGSYVLMSNLFAEKGLWEKAAKIRKGM 181
            SVLQSLLGSCR++GN+++A ++   LI+M P  SG YVLM+NL+AEKG WEK A++R+GM
Sbjct: 646  SVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGM 705

Query: 182  RDKGVRKEIAFSWVDASGANDSLYMHGFSADDKSHPKSEGIYRMAELLGSEMKYLEKEKE 361
            R +GV+KE+ FSWVD S   DSLY+HGFS+ DKSHP+SE I ++AE LG +MK L++ +E
Sbjct: 706  RGRGVKKEVGFSWVDVSNV-DSLYLHGFSSGDKSHPESENICKIAEFLGLQMKILKENRE 764


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