BLASTX nr result

ID: Cephaelis21_contig00025839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025839
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana t...   163   1e-38
ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform...   158   4e-37
gb|AFK34998.1| unknown [Lotus japonicus]                              157   1e-36
ref|XP_003633286.1| PREDICTED: uncharacterized protein LOC100260...   156   1e-36
dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|...   155   2e-36

>gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana tabacum]
          Length = 108

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/108 (71%), Positives = 91/108 (84%)
 Frame = -2

Query: 344 MSAYKAFKACVPVEWSDKLYVTLVRGIPGTRALHRRTLEALHLTKCNRTIVRKNTPTLRG 165
           MSAY AFKAC P+ WS  LY+TLVRGIPGTR LHRRTLEAL L KCNRT++R NTPT+RG
Sbjct: 1   MSAYNAFKACAPISWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 164 MLNQVKRLVAIETKEMYEARKQKEANERALQPPLVVCHHSAPRTESSQ 21
           ML QVKRLV IET+EMY+ARK+K ++ +AL+PPLVV HH+AP  +S Q
Sbjct: 61  MLQQVKRLVVIETEEMYKARKEKLSDHKALRPPLVVNHHAAPAADSVQ 108


>ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera]
           gi|359474731|ref|XP_003631524.1| PREDICTED: 50S
           ribosomal protein L30 isoform 2 [Vitis vinifera]
           gi|359474733|ref|XP_003631525.1| PREDICTED: 50S
           ribosomal protein L30 isoform 3 [Vitis vinifera]
           gi|296085477|emb|CBI29209.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/107 (71%), Positives = 87/107 (81%)
 Frame = -2

Query: 344 MSAYKAFKACVPVEWSDKLYVTLVRGIPGTRALHRRTLEALHLTKCNRTIVRKNTPTLRG 165
           M+A+KAFKACVPV WS  LY+TLVRGIPGTR LHRRTLEAL L KCNRT++R NTPT+RG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 164 MLNQVKRLVAIETKEMYEARKQKEANERALQPPLVVCHHSAPRTESS 24
           ML QVKRLV IET+EMY+ARK KE N RAL+PPLV+ H   P    S
Sbjct: 61  MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDS 107


>gb|AFK34998.1| unknown [Lotus japonicus]
          Length = 116

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/106 (70%), Positives = 88/106 (83%)
 Frame = -2

Query: 350 EEMSAYKAFKACVPVEWSDKLYVTLVRGIPGTRALHRRTLEALHLTKCNRTIVRKNTPTL 171
           E M+A+KA+KACVP+ WS  LY+TLVRGIPGTR LHRRTLEAL L KCNRT++R NTPT+
Sbjct: 8   EGMNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTV 67

Query: 170 RGMLNQVKRLVAIETKEMYEARKQKEANERALQPPLVVCHHSAPRT 33
           RGML QVKRLV IET+EMY+ARKQKE   RAL+PPLV+ H  +  T
Sbjct: 68  RGMLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSAT 113


>ref|XP_003633286.1| PREDICTED: uncharacterized protein LOC100260125 [Vitis vinifera]
           gi|147859664|emb|CAN78893.1| hypothetical protein
           VITISV_007514 [Vitis vinifera]
          Length = 108

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/107 (71%), Positives = 87/107 (81%)
 Frame = -2

Query: 344 MSAYKAFKACVPVEWSDKLYVTLVRGIPGTRALHRRTLEALHLTKCNRTIVRKNTPTLRG 165
           M+A+KAFKACVPV WS  LY+TLVRGIPGTR LHRRTLEAL L KCNRT++R NTPT+RG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 164 MLNQVKRLVAIETKEMYEARKQKEANERALQPPLVVCHHSAPRTESS 24
           ML QVKRLV IET+EM++ARK KE N RAL+PPLV+ H   P    S
Sbjct: 61  MLQQVKRLVVIETEEMHKARKLKETNHRALRPPLVINHVLPPPANDS 107


>dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|AFK47535.1| unknown
           [Lotus japonicus]
          Length = 107

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/104 (71%), Positives = 87/104 (83%)
 Frame = -2

Query: 344 MSAYKAFKACVPVEWSDKLYVTLVRGIPGTRALHRRTLEALHLTKCNRTIVRKNTPTLRG 165
           M+A+KA+KACVP+ WS  LY+TLVRGIPGTR LHRRTLEAL L KCNRT++R NTPT+RG
Sbjct: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60

Query: 164 MLNQVKRLVAIETKEMYEARKQKEANERALQPPLVVCHHSAPRT 33
           ML QVKRLV IET+EMY+ARKQKE   RAL+PPLV+ H  +  T
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSAT 104


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