BLASTX nr result

ID: Cephaelis21_contig00025742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025742
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263...   155   1e-35
emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]   155   1e-35
ref|NP_001154591.1| DnaJ domain-containing protein [Arabidopsis ...   145   1e-32
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   142   9e-32

>ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|222857913|gb|EEE95460.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  163 bits (413), Expect = 3e-38
 Identities = 94/167 (56%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
 Frame = +3

Query: 216 SFCYQNADAISSLSQKTVENNANCHNFPSRCSFSFPCTLGPAVLKNSPPHLSLSYRSSSF 395
           S C+ ++       QKTV N  NCHNFPS+   + P  L P          SLS  SS F
Sbjct: 3   SLCFYSSLPPIPPFQKTVTNPNNCHNFPSK---TIPIRLFP----------SLS-TSSKF 48

Query: 396 ILHSYDKNDES--LSTSAAYEVLGIDSSCTPAQLKAAFRAKVKEYHPDVRQDKGSSDIMI 569
             H   + +E   LSTS+AY VLGI   C+ A +KAAFRAKVK++HPD+ +D   SD+MI
Sbjct: 49  KPHCLGRAEEDSPLSTSSAYTVLGIKPGCSAAAIKAAFRAKVKQFHPDLNKDGKVSDLMI 108

Query: 570 RHVIKAYEILSNCSGSEIIERECLDPFDEPECEAFDIFVNEVLCVGK 710
           R VI+AYE+LSN S  EIIERECLDPF+EPECEAFDIFVNEVLCVGK
Sbjct: 109 RRVIQAYEMLSNFSRPEIIERECLDPFEEPECEAFDIFVNEVLCVGK 155


>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
           gi|296088328|emb|CBI36773.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  155 bits (391), Expect = 1e-35
 Identities = 84/138 (60%), Positives = 100/138 (72%), Gaps = 5/138 (3%)
 Frame = +3

Query: 312 FSFPCTLGPAVLKNSPPHLSLSYRSSS---FILHSYDKNDES--LSTSAAYEVLGIDSSC 476
           F+FP T             SLS+ SSS   F ++  D+  E   LS S+AY VLG+D SC
Sbjct: 27  FNFPATF----------KTSLSFSSSSTSRFTVNCRDRTGEEPKLSDSSAYAVLGVDPSC 76

Query: 477 TPAQLKAAFRAKVKEYHPDVRQDKGSSDIMIRHVIKAYEILSNCSGSEIIERECLDPFDE 656
           +  +LKAAFRAKVK++HPDV ++ G SD MIR VI+AYE+LS CS SEIIERECLDPFDE
Sbjct: 77  SAPELKAAFRAKVKQFHPDVNKEGGDSDKMIRLVIQAYELLSCCSRSEIIERECLDPFDE 136

Query: 657 PECEAFDIFVNEVLCVGK 710
           PECEAFD+FVNEVLCVGK
Sbjct: 137 PECEAFDLFVNEVLCVGK 154


>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
          Length = 322

 Score =  155 bits (391), Expect = 1e-35
 Identities = 84/137 (61%), Positives = 100/137 (72%), Gaps = 5/137 (3%)
 Frame = +3

Query: 312 FSFPCTLGPAVLKNSPPHLSLSYRSSS---FILHSYDKNDES--LSTSAAYEVLGIDSSC 476
           F+FP T             SLS+ SSS   F ++  D+  E   LS S+AY VLG+D SC
Sbjct: 26  FNFPATF----------KTSLSFSSSSTSRFTVNCRDRTGEEPKLSDSSAYAVLGVDPSC 75

Query: 477 TPAQLKAAFRAKVKEYHPDVRQDKGSSDIMIRHVIKAYEILSNCSGSEIIERECLDPFDE 656
           + A+LKAAFRAKVK++HPDV ++ G SD MIR VI+AYE+LS CS SEIIERECLDPFDE
Sbjct: 76  SAAELKAAFRAKVKQFHPDVNKEGGDSDKMIRLVIQAYELLSCCSRSEIIERECLDPFDE 135

Query: 657 PECEAFDIFVNEVLCVG 707
           PECEAFD+FVNEVLCVG
Sbjct: 136 PECEAFDLFVNEVLCVG 152


>ref|NP_001154591.1| DnaJ domain-containing protein [Arabidopsis thaliana]
           gi|332640701|gb|AEE74222.1| DnaJ domain-containing
           protein [Arabidopsis thaliana]
          Length = 244

 Score =  145 bits (365), Expect = 1e-32
 Identities = 71/110 (64%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
 Frame = +3

Query: 384 SSSFILHSYDKNDES-LSTSAAYEVLGIDSSCTPAQLKAAFRAKVKEYHPDVRQDKGSSD 560
           S  FI     KN E  LS+S+ Y +LG++ SC+ ++LKAAFRAKVK+YHPDV +D  +SD
Sbjct: 24  SQRFIPSCRGKNREDPLSSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNKDGSNSD 83

Query: 561 IMIRHVIKAYEILSNCSGSEIIERECLDPFDEPECEAFDIFVNEVLCVGK 710
           IMIR +I+AYE+L+N S SEIIE ECLDPFD PECEA D+FVNEVLCVGK
Sbjct: 84  IMIRRIIQAYEMLTNYSRSEIIEGECLDPFDHPECEALDVFVNEVLCVGK 133


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  142 bits (357), Expect = 9e-32
 Identities = 73/115 (63%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
 Frame = +3

Query: 375 SYRSSSFILHSYDK--NDESLSTS-AAYEVLGIDSSCTPAQLKAAFRAKVKEYHPDVRQD 545
           S+ +S F ++  ++  +D  LS+S AA+ VLG+D  C+ A+LKAAFRAKVK++HPDV +D
Sbjct: 511 SHSNSKFTVNCSERIGDDTPLSSSSAAHMVLGVDPGCSAAELKAAFRAKVKQFHPDVNRD 570

Query: 546 KGSSDIMIRHVIKAYEILSNCSGSEIIERECLDPFDEPECEAFDIFVNEVLCVGK 710
           +   D MIR VI+AYEILSN S SEIIE ECLDPFD PECEAFDIFVNEVLC GK
Sbjct: 571 RKFPDTMIRRVIQAYEILSNFSRSEIIESECLDPFDNPECEAFDIFVNEVLCAGK 625


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