BLASTX nr result

ID: Cephaelis21_contig00025423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025423
         (1816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   2e-15
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    86   2e-14
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    85   7e-14
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    81   8e-13
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    80   2e-12

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
 Frame = -3

Query: 572 FWNARGLKKKSAISRLKILVSQHSLNLVAVCEPHISDIYLHKLQLKLGFANMLSNDES-- 399
           FWN RG  +K+ +         +++ ++ +CE           QL +  A  L +D    
Sbjct: 5   FWNVRGGCRKNVMEECSDFCKNNNIKILMLCETKSQS---PPSQLAVSAAGFLHHDSIPA 61

Query: 398 -----------RICVFYSNFLSGVIIDKNSQYVAIQFSYLPTQFDFLALFVHASCDHSVR 252
                      R C+   N  S V+I K+ +++A   + L     F+A+F++A      +
Sbjct: 62  MGYSGGLWLFWRDCIL--NPFSLVVIYKSVRFIACSINLLNQNLQFVAIFIYAPAQKEFK 119

Query: 251 KNLWIHISNLISS-SMPLILMGDFNTILCASEKLGGSPYTQNESVDFANFVHHNSLVDLG 75
            + W  +   +SS S P I++GDFN I   S+KLGG+P++ + +    N        ++ 
Sbjct: 120 SSFWDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAPFSSSRAYYMQNLFSQVDCTEIS 179

Query: 74  FSGSSYTWCNNRVGTQRIYKRLDR 3
           F+G  +TW   + G   I++RLDR
Sbjct: 180 FTGQIFTWRKKKDGPNNIHERLDR 203


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 9/203 (4%)
 Frame = -3

Query: 584 IKSLFWNARGLKKKSA--ISRLKILVSQHSLNLVAVCEPHISDIYLHKLQLKLGFANMLS 411
           +K L WN RGL+   +  I  L  LV Q    ++ + E       + KL + LGF N+ +
Sbjct: 1   MKVLAWNCRGLRSADSPTIPFLGWLVRQCLPQILFLSETKSDSSLISKLAMYLGFPNVAT 60

Query: 410 ----NDESRICVFYSNFLSGVIIDKNSQYVAIQFSYLPTQFDFL--ALFVHASCDHSVRK 249
               N+   + +F+SN ++  +   ++ Y A   + L  +  ++   + ++ S     R 
Sbjct: 61  VDSINNAGGLALFWSNDVNLDLKVSSTNYFACNINDLVDEDVYIWNLILLYGSPYLDNRG 120

Query: 248 NLWIHISNLISSS-MPLILMGDFNTILCASEKLGGSPYTQNESVDFANFVHHNSLVDLGF 72
            +W  I++ IS + +  ++MGDFN I   ++K+GGS Y   +   F+ +     L ++ F
Sbjct: 121 EVWERIADYISRNPLDSVIMGDFNQIEFLNQKMGGSTYIPGKET-FSQWRDQLGLSEINF 179

Query: 71  SGSSYTWCNNRVGTQRIYKRLDR 3
            G ++TWCNNR   +R+Y+RLDR
Sbjct: 180 QGQNFTWCNNRSEPERVYERLDR 202


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
 Frame = -3

Query: 575 LFWNARGLKKKSAISRLKILVSQHSLNLVAVCEPHISDIYLHKLQLKLGFANMLSND--- 405
           L WN RG  K +    ++ ++ + + +++A+ E H       +    LGF N    D   
Sbjct: 4   LLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVDVVG 63

Query: 404 -ESRICVFYSNFLSGV-IIDKNSQYVAIQFSYLPTQFDFLALF-VHASCDHSVRKNLWIH 234
               + + +   +  V I++ +SQ++  +   +    + L L  V+A+   S R  LW  
Sbjct: 64  QSGGLWLLWKAEVGEVTIVNSSSQFIHAR---IVNGVEALHLVTVYAAPSASRRSGLWEK 120

Query: 233 ISNLISS-SMPLILMGDFNTILCASEKLGGSPYTQNESVDFANFVHHNSLVDLGFSGSSY 57
           + +++ +   PLI+ GDFNTI+   E++GG+     +SV F N+V    L+D+GF G+ Y
Sbjct: 121 LRDVVQAIDEPLIIGGDFNTIIRTDERIGGNGQLSPDSVAFGNWVSDLFLIDMGFKGNRY 180

Query: 56  TWCNNRVGTQRIYKRLDR 3
           TW   R  +  I KRLDR
Sbjct: 181 TWKRGRAASNFIAKRLDR 198


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 81.3 bits (199), Expect = 8e-13
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
 Frame = -3

Query: 584  IKSLFWNARGLKKKSAISRLKILVSQHSLNLVAVCEPHISDIYLHKLQLKLG-----FAN 420
            +K + WN RG  K      +K  + ++  ++  + E  I     +K+   +        N
Sbjct: 518  MKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNN 577

Query: 419  MLSNDESRICVFYSNFLSGVI-IDKNSQYVAIQFSYLPTQ--FDFLALFVHASCDHSVRK 249
              S    RI V ++  +  V  I  ++Q +  +   L +   F+F+A++   + +   RK
Sbjct: 578  YDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQ--RK 635

Query: 248  NLWIHISNLIS-SSMPLILMGDFNTILCASEKLGGSPYTQNESVDFANFVHHNSLVDLGF 72
             LW  I++  + +S  L++ GDFN +L   ++  G+P TQ+E  DF++ + HN L ++  
Sbjct: 636  ELWNFIAHTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRT 695

Query: 71   SGSSYTWCNNRVGTQRIYKRLDR 3
             G  YTWCNN+    RIY ++DR
Sbjct: 696  IGDYYTWCNNQTSGDRIYSKIDR 718


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
 Frame = -3

Query: 575  LFWNARGLKKKSAISRLKILVSQHSLNLVAVCEPHISDIYLHKLQLKL---GFANMLSND 405
            L WN RGL   + +  L+ L+ +    LV +CE   S   + +L+ KL   GF  + S  
Sbjct: 639  LAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEG 698

Query: 404  ESR-ICVFYSNFLSGVIIDKNSQYVAIQFSYLPTQFDFLALFVHASCDHSVRKNLWIHIS 228
            +S  + +++   +S  + D N +Y+       P +  +   FV+       R  +W  + 
Sbjct: 699  KSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMWSLLR 758

Query: 227  NLI-SSSMPLILMGDFNTILCASEKLGGSPYTQNESVDFANFVHHNSLVDLGFSGSSYTW 51
             +  SS++P +++GDFN  L   E    +P  + +  +F + ++   L DLGF G  +T+
Sbjct: 759  TIRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTY 818

Query: 50   CNNRVGTQRIYKRLDR 3
             N R G + +  RLDR
Sbjct: 819  DNRRDGWRNVKVRLDR 834


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