BLASTX nr result

ID: Cephaelis21_contig00025409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025409
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   146   2e-33
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   131   5e-29
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...   118   4e-25
ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp....   114   8e-24

>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
           gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
           putative [Ricinus communis]
          Length = 1641

 Score =  146 bits (369), Expect = 2e-33
 Identities = 77/117 (65%), Positives = 94/117 (80%), Gaps = 1/117 (0%)
 Frame = -3

Query: 350 PARFSELQIQAYLKTVAFRREIDEVQKAAAGKGLGGVQTSRIASEANREFIFSSNYSGDK 171
           P +FSELQI+AYLKTVAFRREID VQKAAAG G+GGVQ+SRIASEANREFIFSS+++GDK
Sbjct: 322 PEKFSELQIEAYLKTVAFRREIDHVQKAAAGNGVGGVQSSRIASEANREFIFSSSFTGDK 381

Query: 170 LDLTATGEGRKNSDQIQAPLINPSGGAVN-VASTEKCSAVEGSPLDEPQRLLENDVE 3
             LT+TG  R  + Q QAP +NP+  ++N V ST K +AV GS  DEP+R+ + DVE
Sbjct: 382 QLLTSTGVQRNGNKQQQAPTMNPTFDSMNCVTSTSKSNAVSGSVQDEPRRVFDEDVE 438


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/116 (61%), Positives = 82/116 (70%)
 Frame = -3

Query: 350 PARFSELQIQAYLKTVAFRREIDEVQKAAAGKGLGGVQTSRIASEANREFIFSSNYSGDK 171
           PA FSELQIQAYLKTVAFRREIDEVQK+AAG+G+GGVQTSRIASEANRE+IFSS+++GDK
Sbjct: 251 PAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTGDK 310

Query: 170 LDLTATGEGRKNSDQIQAPLINPSGGAVNVASTEKCSAVEGSPLDEPQRLLENDVE 3
             LT  G  +    Q Q P   P     NVAST K +    S   EP  +  +DVE
Sbjct: 311 EALTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVE 366


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/116 (61%), Positives = 82/116 (70%)
 Frame = -3

Query: 350 PARFSELQIQAYLKTVAFRREIDEVQKAAAGKGLGGVQTSRIASEANREFIFSSNYSGDK 171
           PA FSELQIQAYLKTVAFRREIDEVQK+AAG+G+GGVQTSRIASEANRE+IFSS+++GDK
Sbjct: 251 PAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTGDK 310

Query: 170 LDLTATGEGRKNSDQIQAPLINPSGGAVNVASTEKCSAVEGSPLDEPQRLLENDVE 3
             LT  G  +    Q Q P   P     NVAST K +    S   EP  +  +DVE
Sbjct: 311 EALTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVE 366


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
           gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
           protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/82 (74%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
 Frame = -3

Query: 350 PARFSELQIQAYLKTVAFRREIDEVQKAAAGKGLGGVQTSRIASEANREFIFSSNYSGDK 171
           PA+FSELQIQAYLKTVAFRR+ID+VQKAAAG+G+GGVQTSRIASEANREFIFSS+++GDK
Sbjct: 322 PAKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQTSRIASEANREFIFSSSFTGDK 381

Query: 170 LDLTATGEGRKNSDQ-IQAPLI 108
             L A+G   KN D+ +QAP++
Sbjct: 382 QAL-ASGRAEKNGDKDLQAPIV 402


>ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321256|gb|EFH51677.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1463

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/113 (53%), Positives = 80/113 (70%)
 Frame = -3

Query: 350 PARFSELQIQAYLKTVAFRREIDEVQKAAAGKGLGGVQTSRIASEANREFIFSSNYSGDK 171
           P +FSELQI+AYLKTVAFRREI+EVQ++A G+ +GGVQTSRIASEANREFIFSS+++GDK
Sbjct: 314 PEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSRIASEANREFIFSSSFAGDK 373

Query: 170 LDLTATGEGRKNSDQIQAPLINPSGGAVNVASTEKCSAVEGSPLDEPQRLLEN 12
            +L +  EGR + +Q +    +      N +S +K  A      DEP+   EN
Sbjct: 374 EELASAREGRNDENQKKTSQQSLPVPVKNASSVKKSDATIELDRDEPKNPDEN 426


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