BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025366
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    93   9e-21
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    87   7e-20
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    86   1e-19
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    84   2e-19
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    84   2e-19

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 92.8 bits (229), Expect(3) = 9e-21
 Identities = 40/78 (51%), Positives = 57/78 (73%)
 Frame = +3

Query: 66   RMGFAPTFIRWIMNCINSISYSFLVNGSPYNFVKPTRGIHQGDP*SPYLFLVITEGLSNL 245
            ++GFAP +++WIM C+ S+SY  L+NGSPY  + P+RGI QGDP SPYLFL   E LSN+
Sbjct: 957  QLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNM 1016

Query: 246  IKQAVAQERITGVKKQPD 299
            +++A   ++I G+K   D
Sbjct: 1017 LRKAEVNKQIHGMKITKD 1034



 Score = 29.6 bits (65), Expect(3) = 9e-21
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 1   LKLDMSKAYDRVVWKFIGSI 60
           +K D+SKAYDRV W F+  +
Sbjct: 935 VKTDISKAYDRVEWNFLEKV 954



 Score = 22.3 bits (46), Expect(3) = 9e-21
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +1

Query: 310  VTHLLFADDS 339
            ++HLLFADDS
Sbjct: 1038 ISHLLFADDS 1047


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 87.4 bits (215), Expect(3) = 7e-20
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
 Frame = +3

Query: 45   VYWFYLWRM----GFAPTFIRWIMNCINSISYSFLVNGSPYNFVKPTRGIHQGDP*SPYL 212
            V W +L RM    GF   F+  IM+C+ S++YS L+ G+P+  +KP+RG+ QGDP SPYL
Sbjct: 872  VEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYL 931

Query: 213  FLVITEGLSNLIKQAVAQERITGV 284
            FL++ EGLS LI++A  +++I GV
Sbjct: 932  FLIVAEGLSALIRKAEREQQIHGV 955



 Score = 32.0 bits (71), Expect(3) = 7e-20
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   LKLDMSKAYDRVVWKFI 51
           LKLDM+KAYDRV W F+
Sbjct: 861 LKLDMTKAYDRVEWGFL 877



 Score = 22.3 bits (46), Expect(3) = 7e-20
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 304 PMVTHLLFADDS 339
           P V+HL +ADDS
Sbjct: 962 PSVSHLFYADDS 973


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 85.9 bits (211), Expect(3) = 1e-19
 Identities = 38/76 (50%), Positives = 55/76 (72%)
 Frame = +3

Query: 60  LWRMGFAPTFIRWIMNCINSISYSFLVNGSPYNFVKPTRGIHQGDP*SPYLFLVITEGLS 239
           L R+GF   +IRW+M C+ ++SYSFL+NGSP   V P+RG+ QGDP SPYLF++ TE LS
Sbjct: 534 LMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLS 593

Query: 240 NLIKQAVAQERITGVK 287
            L ++A  +  + G++
Sbjct: 594 GLCRKAQEKGVMVGIR 609



 Score = 31.2 bits (69), Expect(3) = 1e-19
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 1   LKLDMSKAYDRVVWKFIGSI 60
           +K DMSKAYDR+ W F+  +
Sbjct: 514 IKTDMSKAYDRIKWNFLQEV 533



 Score = 23.9 bits (50), Expect(3) = 1e-19
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 304 PMVTHLLFADDS 339
           P V HLLFADD+
Sbjct: 615 PQVNHLLFADDT 626


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 84.0 bits (206), Expect(3) = 2e-19
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = +3

Query: 45  VYWFYL----WRMGFAPTFIRWIMNCINSISYSFLVNGSPYNFVKPTRGIHQGDP*SPYL 212
           V W +L     +MGFA  ++ WI+ CI+S+SY  L+NGSP  F+KP+RGI QGDP SP+L
Sbjct: 531 VEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFL 590

Query: 213 FLVITEGLSNLIKQAVAQERITGVK 287
           F++ TE L   +K A    RI G++
Sbjct: 591 FILCTEALVAKLKDAEWHGRIQGLQ 615



 Score = 31.6 bits (70), Expect(3) = 2e-19
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 1   LKLDMSKAYDRVVWKFIGSI 60
           +K DMSKAYDRV W F+ ++
Sbjct: 520 IKTDMSKAYDRVEWSFLRAL 539



 Score = 25.0 bits (53), Expect(3) = 2e-19
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 292 SRI*PMVTHLLFADDS 339
           SR  P  +HLLFADDS
Sbjct: 617 SRASPSTSHLLFADDS 632


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 84.0 bits (206), Expect(3) = 2e-19
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = +3

Query: 45  VYWFYL----WRMGFAPTFIRWIMNCINSISYSFLVNGSPYNFVKPTRGIHQGDP*SPYL 212
           V W +L     +MGFA  ++ WI+ CI+S+SY  L+NGSP  F+KP+RGI QGDP SP+L
Sbjct: 165 VEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFL 224

Query: 213 FLVITEGLSNLIKQAVAQERITGVK 287
           F++ TE L   +K A    RI G++
Sbjct: 225 FILCTEALVAKLKDAEWHGRIQGLQ 249



 Score = 31.6 bits (70), Expect(3) = 2e-19
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 1   LKLDMSKAYDRVVWKFIGSI 60
           +K DMSKAYDRV W F+ ++
Sbjct: 154 IKTDMSKAYDRVEWSFLRAL 173



 Score = 25.0 bits (53), Expect(3) = 2e-19
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 292 SRI*PMVTHLLFADDS 339
           SR  P  +HLLFADDS
Sbjct: 251 SRASPSTSHLLFADDS 266