BLASTX nr result

ID: Cephaelis21_contig00025321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025321
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   194   5e-48
ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabac...   177   2e-43
ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis tha...   131   5e-29
emb|CBI20529.3| unnamed protein product [Vitis vinifera]              125   3e-27
gb|AFK45228.1| unknown [Medicago truncatula]                           92   6e-17

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  194 bits (494), Expect = 5e-48
 Identities = 106/167 (63%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
 Frame = -1

Query: 494  LLFIIIIR*AVTCWVFHHPIHNK*NETWRKISEHEASCLF--------FFKPPIRSRSPL 339
            L F    + A  CW FHHPIHNK NETWRK SEH A+  F        F + PIRSRSPL
Sbjct: 952  LQFTAPFKCAGACWFFHHPIHNKSNETWRKRSEHFAAEEFIILERVFVFLQTPIRSRSPL 1011

Query: 338  LTGSRLISLPLATKMFQFXXXXXXXXXXXXXXXXXXXXXXXXXTKMFQFAKFEKSKERRL 159
            LTGSRLISLPLATKMF                               QFAKFEKSKERRL
Sbjct: 1012 LTGSRLISLPLATKMF-------------------------------QFAKFEKSKERRL 1040

Query: 158  ATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSF*SST 18
            A ELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSF S T
Sbjct: 1041 AAELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 1087


>ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabacum]
           gi|57014030|ref|YP_173501.1| hypothetical protein
           NitaMp164 [Nicotiana tabacum]
           gi|56806536|dbj|BAD83437.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
           gi|56806666|dbj|BAD83567.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 138

 Score =  177 bits (448), Expect(2) = 2e-43
 Identities = 92/126 (73%), Positives = 93/126 (73%)
 Frame = -1

Query: 395 HEASCLFFFKPPIRSRSPLLTGSRLISLPLATKMFQFXXXXXXXXXXXXXXXXXXXXXXX 216
           +EASCLFFFKPPIRSRSPLLTGSRLISLPLATKMF                         
Sbjct: 14  NEASCLFFFKPPIRSRSPLLTGSRLISLPLATKMF------------------------- 48

Query: 215 XXTKMFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 36
                 QFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH
Sbjct: 49  ------QFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 102

Query: 35  SF*SST 18
           SF S T
Sbjct: 103 SFRSCT 108



 Score = 24.3 bits (51), Expect(2) = 2e-43
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 421 MKPGEK*VNTKLR 383
           MKPGEK VNT LR
Sbjct: 1   MKPGEKEVNTLLR 13


>ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis thaliana]
           gi|41017293|sp|P93276.1|M030_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00030;
           AltName: Full=ORF107a gi|1785675|emb|CAA69780.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 107

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/67 (89%), Positives = 62/67 (92%)
 Frame = -1

Query: 203 MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSF*S 24
           MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSF S
Sbjct: 1   MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRS 60

Query: 23  STYGAVH 3
            T G ++
Sbjct: 61  CTQGTLN 67


>emb|CBI20529.3| unnamed protein product [Vitis vinifera]
          Length = 80

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -1

Query: 203 MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSF*S 24
           MFQFAKFEKSKERRLATELGYGF IGDPWITDGISPWPFAS+SVLPSQCPGIHPMHSF S
Sbjct: 1   MFQFAKFEKSKERRLATELGYGFLIGDPWITDGISPWPFASQSVLPSQCPGIHPMHSFRS 60

Query: 23  ST 18
            T
Sbjct: 61  CT 62


>gb|AFK45228.1| unknown [Medicago truncatula]
          Length = 41

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +3

Query: 36  MHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 158
           MHWMDARALRRKDAF GERPWGDTVCDPWISDRETVSKLRG
Sbjct: 1   MHWMDARALRRKDAFGGERPWGDTVCDPWISDRETVSKLRG 41


Top