BLASTX nr result

ID: Cephaelis21_contig00025260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025260
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...    99   3e-19
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...    95   5e-18
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...    94   9e-18
gb|AFK39838.1| unknown [Lotus japonicus]                               94   9e-18
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/68 (75%), Positives = 52/68 (76%)
 Frame = +3

Query: 3   VLEELAVLRKKPDAQPEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXX 182
           VLEEL  L+KKPDAQ EEVLPIEKLIAEAYSVIDKAVKVGTLHRNTG             
Sbjct: 108 VLEELDGLKKKPDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKA 167

Query: 183 VEIHHGWY 206
           VEIHHGWY
Sbjct: 168 VEIHHGWY 175


>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/68 (73%), Positives = 50/68 (73%)
 Frame = +3

Query: 3   VLEELAVLRKKPDAQPEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXX 182
           VLE L  LRKK DAQ EEVLPIEKLIAEAYSVIDKAVKVGTLHRNTG             
Sbjct: 108 VLEALDDLRKKSDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKA 167

Query: 183 VEIHHGWY 206
           VEIHHGWY
Sbjct: 168 VEIHHGWY 175


>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = +3

Query: 3   VLEELAVLRKKPDAQPEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXX 182
           VLE L  L+KK DAQPEE+LPIEKLI EAYSVIDKA++VGTLHRNTG             
Sbjct: 102 VLEALESLKKKSDAQPEEILPIEKLIGEAYSVIDKAIRVGTLHRNTGGHRKSRLARRKKV 161

Query: 183 VEIHHGWY 206
           VEIHHGWY
Sbjct: 162 VEIHHGWY 169


>gb|AFK39838.1| unknown [Lotus japonicus]
          Length = 79

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = +3

Query: 3   VLEELAVLRKKPDAQPEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXX 182
           VLE L  L+KK DAQPEE+LPIEKLI EAYSVIDKA++VGTLHRNTG             
Sbjct: 4   VLEALESLKKKSDAQPEEILPIEKLIGEAYSVIDKAIRVGTLHRNTGGHRKPRLARRKKV 63

Query: 183 VEIHHGWY 206
           VEIHHGWY
Sbjct: 64  VEIHHGWY 71


>ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|222869743|gb|EEF06874.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/68 (70%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   VLEELAVLRKKPDAQPEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXX 182
           VLE L  L+KKP+AQ EEVLPIEKLIAEAYSVIDKA+KVGTLHRNTG             
Sbjct: 105 VLEALDDLKKKPEAQFEEVLPIEKLIAEAYSVIDKAIKVGTLHRNTGARRKSRLARRKKA 164

Query: 183 VEIHHGWY 206
           VEIHHGWY
Sbjct: 165 VEIHHGWY 172