BLASTX nr result

ID: Cephaelis21_contig00025256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025256
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   369   1e-99
emb|CBI25318.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   356   9e-96
ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   331   3e-88
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l...   328   2e-87

>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplastic-like [Vitis
            vinifera]
          Length = 480

 Score =  369 bits (947), Expect = 1e-99
 Identities = 194/312 (62%), Positives = 239/312 (76%), Gaps = 2/312 (0%)
 Frame = -2

Query: 1423 VLWTDYELEMIRQSSTYQETIKQRNHFEKEYLAIKPVLDQFREN-FLDVSLKDFTYACAL 1247
            + W++ EL+MI+QSS YQETI Q+   +K++LAIKPVL  F EN F D+SLK+F +ACAL
Sbjct: 149  IFWSEGELKMIQQSSVYQETINQKAQIQKDFLAIKPVLHHFSENLFKDISLKEFMHACAL 208

Query: 1246 VTSRAWESSRGVSMIPFADFLNHDGTSEACLWSKEGKLLSEVIADRNYIPGDQVLIRYGK 1067
            V SRAW S++G+S+IPFADF+NHDG S++ L   E K LSEVIADRNY PG+QVLIRYGK
Sbjct: 209  VGSRAWGSTKGLSLIPFADFVNHDGFSDSVLLGDEDKQLSEVIADRNYAPGEQVLIRYGK 268

Query: 1066 FSNSTLALDFGFTLPYNNNDKVQVELDIPHDDHLREMKLELLHRYRAPATQDINKCSSSE 887
            F N+TL LDFGFTLPYN  D+VQ++++IPH D LR +KLELLHR+  P   D+N  SS  
Sbjct: 269  FPNATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLHRHCPPKIGDVNSFSSMG 328

Query: 886  MFFTIKEVKSGCSKGRGIPQAFRAFARILCCNF-QEFSNLASEATQNDGRLARIPLTNKS 710
              FTIKEVKS   KGRGIPQ+ RAFARI CC   QE S+LA EA QNDGRLAR PL + +
Sbjct: 329  NSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVEAAQNDGRLARRPLKSWN 388

Query: 709  REIEAHQLLLSKITQLIKEYDASIKALGQSTSHHMSRRHALRRQLALDLLTGELRVLMSA 530
            REI+AHQ+LLS IT+LI EY+ SIK+L  ++   +    ALR+Q+A DLLTGELRVL SA
Sbjct: 389  REIQAHQVLLSWITRLINEYNTSIKSLPLASP--LYETFALRKQMARDLLTGELRVLKSA 446

Query: 529  SAWLQTYWTTLS 494
             AWL+ Y  TL+
Sbjct: 447  GAWLENYCATLT 458


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  362 bits (930), Expect = 1e-97
 Identities = 194/318 (61%), Positives = 239/318 (75%), Gaps = 8/318 (2%)
 Frame = -2

Query: 1423 VLWTDYELEMIRQSSTYQETIKQRNHFEKEYLAIKPVLDQFREN-FLDVSLKDFTYACAL 1247
            + W++ EL+MI+QSS YQETI Q+   +K++LAIKPVL  F EN F D+SLK+F +ACAL
Sbjct: 150  IFWSEGELKMIQQSSVYQETINQKAQIQKDFLAIKPVLHHFSENLFKDISLKEFMHACAL 209

Query: 1246 VTSRAWESSRGVSMIPFADFLNHDGTSEACLWSKEGKLLSE------VIADRNYIPGDQV 1085
            V SRAW S++G+S+IPFADF+NHDG S++ L   E K LSE      VIADRNY PG+QV
Sbjct: 210  VGSRAWGSTKGLSLIPFADFVNHDGFSDSVLLGDEDKQLSESSSTLEVIADRNYAPGEQV 269

Query: 1084 LIRYGKFSNSTLALDFGFTLPYNNNDKVQVELDIPHDDHLREMKLELLHRYRAPATQDIN 905
            LIRYGKF N+TL LDFGFTLPYN  D+VQ++++IPH D LR +KLELLHR+  P   D+N
Sbjct: 270  LIRYGKFPNATLLLDFGFTLPYNIYDQVQIQVNIPHHDLLRTLKLELLHRHCPPKIGDVN 329

Query: 904  KCSSSEMFFTIKEVKSGCSKGRGIPQAFRAFARILCCNF-QEFSNLASEATQNDGRLARI 728
              SS    FTIKEVKS   KGRGIPQ+ RAFARI CC   QE S+LA EA QNDGRLAR 
Sbjct: 330  SFSSMGNSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVEAAQNDGRLARR 389

Query: 727  PLTNKSREIEAHQLLLSKITQLIKEYDASIKALGQSTSHHMSRRHALRRQLALDLLTGEL 548
            PL + +REI+AHQ+LLS IT+LI EY+ SIK+L  ++   +    ALR+Q+A DLLTGEL
Sbjct: 390  PLKSWNREIQAHQVLLSWITRLINEYNTSIKSLPLASP--LYETFALRKQMARDLLTGEL 447

Query: 547  RVLMSASAWLQTYWTTLS 494
            RVL SA AWL+ Y  TL+
Sbjct: 448  RVLKSAGAWLENYCATLT 465


>ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
            N-methyltransferase, chloroplast precursor, putative
            [Ricinus communis] gi|223535652|gb|EEF37318.1|
            Ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 456

 Score =  356 bits (913), Expect = 9e-96
 Identities = 182/310 (58%), Positives = 237/310 (76%), Gaps = 1/310 (0%)
 Frame = -2

Query: 1423 VLWTDYELEMIRQSSTYQETIKQRNHFEKEYLAIKPVLDQFRENFLDVSLKDFTYACALV 1244
            + W+  EL+MI QSS Y+ETIKQ+   EK++L IKPVL+ F +    ++ +DF +A ALV
Sbjct: 126  IFWSKSELDMIFQSSVYKETIKQKAQIEKDFLTIKPVLEHFPQISRSITFQDFMHAYALV 185

Query: 1243 TSRAWESSRGVSMIPFADFLNHDGTSEACLWSKEGKLLSEVIADRNYIPGDQVLIRYGKF 1064
             SRAW S++GVS+IPFADFLNHDG SEA + + E K +SEV ADRNY P ++VLIRYGKF
Sbjct: 186  KSRAWGSTKGVSLIPFADFLNHDGFSEAVVLNDEDKQVSEVAADRNYAPHEEVLIRYGKF 245

Query: 1063 SNSTLALDFGFTLPYNNNDKVQVELDIPHDDHLREMKLELLHRYRAPATQDINKCSSSEM 884
            SN+TL LDFGF+LPYN +++V+++++IP  D LREMK E+L  +  PAT+D N  +SS  
Sbjct: 246  SNATLLLDFGFSLPYNIHEQVEIQINIPDHDTLREMKFEILRLHHIPATKDDNGFNSSWD 305

Query: 883  FFTIKEVKSGCSKGRGIPQAFRAFARILCC-NFQEFSNLASEATQNDGRLARIPLTNKSR 707
             F IKEV+S   KG+G+PQ+ RAFAR+LCC + Q+ ++L  EA Q DGRLAR  L N SR
Sbjct: 306  SFLIKEVRSAGGKGKGLPQSLRAFARVLCCTSHQDLNDLVLEAAQTDGRLARRALENSSR 365

Query: 706  EIEAHQLLLSKITQLIKEYDASIKALGQSTSHHMSRRHALRRQLALDLLTGELRVLMSAS 527
            EI+AH++LLS+I Q+I+EY ASIK L  STS  + +R ALRRQ+ALDLLTGELRVL SAS
Sbjct: 366  EIQAHEILLSRINQVIEEYSASIKLLESSTSLSICKRFALRRQMALDLLTGELRVLKSAS 425

Query: 526  AWLQTYWTTL 497
            AWL+ Y T+L
Sbjct: 426  AWLKNYCTSL 435


>ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
            N-methyltransferase [Medicago truncatula]
            gi|355481825|gb|AES63028.1| Ribulose-1,5 bisphosphate
            carboxylase/oxygenase large subunit N-methyltransferase
            [Medicago truncatula]
          Length = 451

 Score =  331 bits (848), Expect = 3e-88
 Identities = 170/311 (54%), Positives = 219/311 (70%), Gaps = 1/311 (0%)
 Frame = -2

Query: 1423 VLWTDYELEMIRQSSTYQETIKQRNHFEKEYLAIKPVLDQFRENFLDVSLKDFTYACALV 1244
            + W + ELEMIRQSS YQETI Q++  EK++L IKPV   F ++F D + KDF +AC LV
Sbjct: 141  IFWNESELEMIRQSSVYQETIYQKSQIEKDFLEIKPVFQPFCQSFGDFTWKDFMHACTLV 200

Query: 1243 TSRAWESSRGVSMIPFADFLNHDGTSEACLWSKEGKLLSEVIADRNYIPGDQVLIRYGKF 1064
             SRAW S++G+S+IPFADFLNHDG SEA + S +    SEV +DR+Y+PG+QVLIRYGKF
Sbjct: 201  GSRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDDNKCSEVFSDRDYVPGEQVLIRYGKF 260

Query: 1063 SNSTLALDFGFTLPYNNNDKVQVELDIPHDDHLREMKLELLHRYRAPATQDINKCSSSEM 884
            SN+TL LDFGFT+PYN  D+VQ++ DIP  D LR  KLELL +Y  P T+D      S  
Sbjct: 261  SNATLMLDFGFTIPYNIYDQVQIQYDIPKYDPLRHTKLELLQQYFVPPTKDAKGSKYSVN 320

Query: 883  FFTIKEVKSGCSKGRGIPQAFRAFARIL-CCNFQEFSNLASEATQNDGRLARIPLTNKSR 707
             F IKEVKS   KG+G+PQ+ RA AR+L C   QE ++L  EA Q DGRLAR PL ++ +
Sbjct: 321  SFAIKEVKSAGGKGKGVPQSLRALARVLSCTTLQELNHLVMEAAQTDGRLARHPLQDRIK 380

Query: 706  EIEAHQLLLSKITQLIKEYDASIKALGQSTSHHMSRRHALRRQLALDLLTGELRVLMSAS 527
            EI+AH++L S   QLI E++A+I +L    S   S R  +RRQ+A DLL GEL +L SAS
Sbjct: 381  EIQAHKMLSSLFIQLIGEHNATITSLDSCDSSSSSERLPVRRQMARDLLHGELHILKSAS 440

Query: 526  AWLQTYWTTLS 494
             WL+ Y  +L+
Sbjct: 441  TWLENYCFSLT 451


>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323853|gb|EFH54274.1| SET domain-containing protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  328 bits (841), Expect = 2e-87
 Identities = 168/311 (54%), Positives = 226/311 (72%), Gaps = 2/311 (0%)
 Frame = -2

Query: 1423 VLWTDYELEMIRQSSTYQETIKQRNHFEKEYLAIKPVLDQFRENFLDVS-LKDFTYACAL 1247
            + W + E  MIR S+ ++ET+KQ+   EKE+  +     Q     ++   L+DF YA AL
Sbjct: 150  IFWGEDEFSMIRCSAVHKETVKQKAQIEKEFSFVAQAFKQHYPMVIERPYLEDFMYAYAL 209

Query: 1246 VTSRAWESSRGVSMIPFADFLNHDGTSEACLWSKEGKLLSEVIADRNYIPGDQVLIRYGK 1067
            V SRAWE+S+G+S+IPFADF+NHDG S + + S E   LSEV ADRNY PGD+V I+YG+
Sbjct: 210  VGSRAWETSKGISLIPFADFMNHDGLSASIVLSDEDNQLSEVTADRNYSPGDEVFIKYGE 269

Query: 1066 FSNSTLALDFGFTLPYNNNDKVQVELDIPHDDHLREMKLELLHRYRAPATQDINKCSSSE 887
            FSN+TL LDFGFT+PYN +D+VQ+++D+P+DD LR+MKL LL  +     +DIN   SS 
Sbjct: 270  FSNATLMLDFGFTVPYNIHDEVQIQMDVPNDDPLRDMKLGLLQTHHTRIVKDINIFHSSC 329

Query: 886  MFFTIKEVKSGCSKGRGIPQAFRAFARILCCNF-QEFSNLASEATQNDGRLARIPLTNKS 710
              FTIKEVKS   KGRGIPQ+ RAFAR+LCC   QE ++L+ EA +NDGRLAR+P  ++S
Sbjct: 330  DTFTIKEVKSTSGKGRGIPQSLRAFARVLCCTIPQELNDLSKEAAKNDGRLARLPFKDRS 389

Query: 709  REIEAHQLLLSKITQLIKEYDASIKALGQSTSHHMSRRHALRRQLALDLLTGELRVLMSA 530
            RE+EAH++LLS I +LI+++ A IK L +S  + +S+R A+RR++A DLL GELRVL SA
Sbjct: 390  RELEAHKILLSHINRLIEDHSACIKELEESKCYFVSQRFAVRRKMAKDLLYGELRVLRSA 449

Query: 529  SAWLQTYWTTL 497
            + WL  Y TTL
Sbjct: 450  AEWLNHYCTTL 460


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