BLASTX nr result

ID: Cephaelis21_contig00025213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025213
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599566.1| Ribulose bisphosphate carboxylase large chai...    59   8e-07
gb|AAL60346.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    59   8e-07
gb|ADZ61897.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    58   2e-06
gb|AFI20731.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    58   2e-06
gb|AFI20729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    58   2e-06

>ref|XP_003599566.1| Ribulose bisphosphate carboxylase large chain [Medicago truncatula]
           gi|355488614|gb|AES69817.1| Ribulose bisphosphate
           carboxylase large chain [Medicago truncatula]
          Length = 268

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 23  DLQIPIAYIKTFQGLPHGIQAERYKLNKYGC 115
           DL+IP+AY+KTFQG PHGIQ ER KLNKYGC
Sbjct: 86  DLRIPVAYVKTFQGPPHGIQVERDKLNKYGC 116


>gb|AAL60346.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Polyspora speciosa]
          Length = 463

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 23  DLQIPIAYIKTFQGLPHGIQAERYKLNKYGC 115
           DL+IP+AY+KTFQG PHGIQ ER KLNKYGC
Sbjct: 125 DLRIPVAYVKTFQGPPHGIQVERDKLNKYGC 155


>gb|ADZ61897.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Hibiscus micranthus]
          Length = 184

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +2

Query: 23  DLQIPIAYIKTFQGLPHGIQAERYKLNKYG 112
           DL+IPIAYIKTFQG PHGIQAER KLNKYG
Sbjct: 128 DLRIPIAYIKTFQGPPHGIQAERDKLNKYG 157


>gb|AFI20731.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Salvia lasiocephala]
          Length = 175

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 23  DLQIPIAYIKTFQGLPHGIQAERYKLNKYG 112
           DL+IP+AYIKTFQG PHGIQAER KLNKYG
Sbjct: 119 DLRIPVAYIKTFQGPPHGIQAERDKLNKYG 148


>gb|AFI20729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Salvia lasiocephala]
           gi|384592147|gb|AFI20730.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit, partial
           (chloroplast) [Salvia lasiocephala]
          Length = 184

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 23  DLQIPIAYIKTFQGLPHGIQAERYKLNKYG 112
           DL+IP+AYIKTFQG PHGIQAER KLNKYG
Sbjct: 128 DLRIPVAYIKTFQGPPHGIQAERDKLNKYG 157


Top