BLASTX nr result

ID: Cephaelis21_contig00025179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025179
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632252.1| PREDICTED: nuclear cap-binding protein subun...   122   5e-45
ref|XP_002274906.1| PREDICTED: nuclear cap-binding protein subun...   122   5e-45
ref|XP_002313362.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-44
gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]             126   3e-44
gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]        126   3e-44

>ref|XP_003632252.1| PREDICTED: nuclear cap-binding protein subunit 1-like isoform 2
           [Vitis vinifera] gi|296083820|emb|CBI24208.3| unnamed
           protein product [Vitis vinifera]
          Length = 865

 Score =  122 bits (307), Expect(2) = 5e-45
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 RSHDFGPITCPEQPNPSAATCGISSGRQRHEAELKYPQRIRRLNIFPASKAEDIQPIDRF 48
           +SHDFGP++CPE P+P +   GI+ G+Q+H+AELKYPQRIRRLNIFPA+K ED+QPIDRF
Sbjct: 253 KSHDFGPLSCPELPDPPSTLSGITCGKQKHDAELKYPQRIRRLNIFPANKIEDLQPIDRF 312

Query: 47  VVEEYLLDVLLFLNG 3
           + EEYLLDVL F NG
Sbjct: 313 IAEEYLLDVLFFFNG 327



 Score = 83.6 bits (205), Expect(2) = 5e-45
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -2

Query: 445 DFLEDLWSRIQELSSAGWKLESVPRPHLSFEAQLVAGRSHDFG 317
           DFLEDLW RIQ LSS GWKL+SVPRPHLSFEAQLVAG+SHDFG
Sbjct: 216 DFLEDLWGRIQVLSSNGWKLDSVPRPHLSFEAQLVAGKSHDFG 258


>ref|XP_002274906.1| PREDICTED: nuclear cap-binding protein subunit 1-like isoform 1
           [Vitis vinifera]
          Length = 855

 Score =  122 bits (307), Expect(2) = 5e-45
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 RSHDFGPITCPEQPNPSAATCGISSGRQRHEAELKYPQRIRRLNIFPASKAEDIQPIDRF 48
           +SHDFGP++CPE P+P +   GI+ G+Q+H+AELKYPQRIRRLNIFPA+K ED+QPIDRF
Sbjct: 253 KSHDFGPLSCPELPDPPSTLSGITCGKQKHDAELKYPQRIRRLNIFPANKIEDLQPIDRF 312

Query: 47  VVEEYLLDVLLFLNG 3
           + EEYLLDVL F NG
Sbjct: 313 IAEEYLLDVLFFFNG 327



 Score = 83.6 bits (205), Expect(2) = 5e-45
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -2

Query: 445 DFLEDLWSRIQELSSAGWKLESVPRPHLSFEAQLVAGRSHDFG 317
           DFLEDLW RIQ LSS GWKL+SVPRPHLSFEAQLVAG+SHDFG
Sbjct: 216 DFLEDLWGRIQVLSSNGWKLDSVPRPHLSFEAQLVAGKSHDFG 258


>ref|XP_002313362.1| predicted protein [Populus trichocarpa] gi|222849770|gb|EEE87317.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  123 bits (308), Expect(2) = 2e-44
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 RSHDFGPITCPEQPNPSAATCGISSGRQRHEAELKYPQRIRRLNIFPASKAEDIQPIDRF 48
           +SH+FGPI  PEQP P +   G+  G+Q+H+AELKYPQRIRRLNIFPASK ED+QPIDRF
Sbjct: 172 KSHEFGPINTPEQPEPLSEVSGVLYGKQKHDAELKYPQRIRRLNIFPASKIEDMQPIDRF 231

Query: 47  VVEEYLLDVLLFLNG 3
           +VEEYLLDVLLFLNG
Sbjct: 232 IVEEYLLDVLLFLNG 246



 Score = 80.9 bits (198), Expect(2) = 2e-44
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = -2

Query: 445 DFLEDLWSRIQELSSAGWKLESVPRPHLSFEAQLVAGRSHDFG 317
           DFLEDLW RIQ LSS GWK++SVPRPHLSFEAQLVAG+SH+FG
Sbjct: 135 DFLEDLWGRIQVLSSNGWKVDSVPRPHLSFEAQLVAGKSHEFG 177


>gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]
          Length = 861

 Score =  126 bits (317), Expect(2) = 3e-44
 Identities = 57/75 (76%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 RSHDFGPITCPEQPNPSAATCGISSGRQRHEAELKYPQRIRRLNIFPASKAEDIQPIDRF 48
           +SHD  P++CPEQP P  A  GI+ GRQ+HEAELKYPQRIRRLNIFP++K ED+QPIDRF
Sbjct: 253 KSHDLSPVSCPEQPGPPGALSGIAFGRQKHEAELKYPQRIRRLNIFPSNKTEDLQPIDRF 312

Query: 47  VVEEYLLDVLLFLNG 3
           VVEEYLLDVL FLNG
Sbjct: 313 VVEEYLLDVLFFLNG 327



 Score = 77.0 bits (188), Expect(2) = 3e-44
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -2

Query: 445 DFLEDLWSRIQELSSAGWKLESVPRPHLSFEAQLVAGRSHD 323
           DFLEDLWSR+Q+LS+ GWKL+SVPR HLSFEAQLVAG+SHD
Sbjct: 216 DFLEDLWSRVQDLSNRGWKLDSVPRLHLSFEAQLVAGKSHD 256


>gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 861

 Score =  126 bits (317), Expect(2) = 3e-44
 Identities = 57/75 (76%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 RSHDFGPITCPEQPNPSAATCGISSGRQRHEAELKYPQRIRRLNIFPASKAEDIQPIDRF 48
           +SHD  P++CPEQP P  A  GI+ GRQ+HEAELKYPQRIRRLNIFP++K ED+QPIDRF
Sbjct: 253 KSHDLSPVSCPEQPGPPGALSGIAFGRQKHEAELKYPQRIRRLNIFPSNKTEDLQPIDRF 312

Query: 47  VVEEYLLDVLLFLNG 3
           VVEEYLLDVL FLNG
Sbjct: 313 VVEEYLLDVLFFLNG 327



 Score = 77.0 bits (188), Expect(2) = 3e-44
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -2

Query: 445 DFLEDLWSRIQELSSAGWKLESVPRPHLSFEAQLVAGRSHD 323
           DFLEDLWSR+Q+LS+ GWKL+SVPR HLSFEAQLVAG+SHD
Sbjct: 216 DFLEDLWSRVQDLSNRGWKLDSVPRLHLSFEAQLVAGKSHD 256


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